RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ARHGAP4P98171 946 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 TTC22Q5TAA0 569 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 TAF2Q6P1X5 1199 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 CUL5Q93034 780 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 IL17RAQ96F46 866 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 SPZ1Q9BXG8 430 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 FAM50BQ9Y247 325 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 NLRC5Q86WI3 1866 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 C5orf67F2Z3F1 127 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 H3BQ06 376 aaPredicted RBP21.52■■□□□ 1.04
NME3-204ENST00000563498 NCK2O43639 380 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 RB1P06400 928 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 PTH1RQ03431 593 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 TCEAL5Q5H9L2 206 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 UTP14CQ5TAP6 766 aaKnown RBP21.52■■□□□ 1.04
NME3-204ENST00000563498 NLRX1Q86UT6 975 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 EXOC6Q8TAG9 804 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 IGDCC4Q8TDY8 1250 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 EHMT1Q9H9B1 1298 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 PRKAG3Q9UGI9 489 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 RWDD3Q9Y3V2 267 aa21.52■■□□□ 1.04
NME3-204ENST00000563498 DOCK5Q9H7D0 1870 aa21.52■■□□□ 1.03
NME3-204ENST00000563498 MEIS2O14770 477 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 CHRNA1P02708 482 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 USP17L6PQ6QN14 398 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 FIBCD1Q8N539 461 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 GPRASP2Q96D09 838 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 RRP36Q96EU6 259 aaKnown RBP21.51■■□□□ 1.03
NME3-204ENST00000563498 CDHR1Q96JP9 859 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 LMAN2LQ9H0V9 348 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 TELO2Q9Y4R8 837 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 TAF6LQ9Y6J9 622 aa21.51■■□□□ 1.03
NME3-204ENST00000563498 DDAH1O94760 285 aa21.5■■□□□ 1.03
NME3-204ENST00000563498 CHMLP26374 656 aa21.5■■□□□ 1.03
NME3-204ENST00000563498 KIF5BP33176 963 aa21.5■■□□□ 1.03
NME3-204ENST00000563498 ANTXR2P58335 489 aa21.5■■□□□ 1.03
NME3-204ENST00000563498 CTCFLQ8NI51 663 aaPredicted RBP21.5■■□□□ 1.03
NME3-204ENST00000563498 LZTS2Q9BRK4 669 aa21.5■■□□□ 1.03
NME3-204ENST00000563498 C11orf84Q9BUA3 381 aaPredicted RBP21.5■■□□□ 1.03
NME3-204ENST00000563498 LINC00271P0C7V0 271 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 PDE4AP27815 886 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 TCF7P36402 384 aaPredicted RBP21.49■■□□□ 1.03
NME3-204ENST00000563498 BMPR1AP36894 532 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 SP4Q02446 784 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 MGAT3Q09327 533 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 RSPH3Q86UC2 560 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 MB21D2Q8IYB1 491 aaPredicted RBP21.49■■□□□ 1.03
NME3-204ENST00000563498 PIBF1Q8WXW3 757 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 MTA3Q9BTC8 594 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 RC3H2Q9HBD1 1191 aaKnown RBP21.49■■□□□ 1.03
NME3-204ENST00000563498 ERAP1Q9NZ08 941 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 SEC63Q9UGP8 760 aaKnown RBP21.49■■□□□ 1.03
NME3-204ENST00000563498 ADGRA3Q8IWK6 1321 aa21.49■■□□□ 1.03
NME3-204ENST00000563498 GHRP10912 638 aa21.48■■□□□ 1.03
NME3-204ENST00000563498 KCNA2P16389 499 aa21.48■■□□□ 1.03
NME3-204ENST00000563498 CTNNB1P35222 781 aa21.48■■□□□ 1.03
NME3-204ENST00000563498 RUFY4Q6ZNE9 571 aa21.48■■□□□ 1.03
NME3-204ENST00000563498 ZNF654Q8IZM8 581 aa21.48■■□□□ 1.03
NME3-204ENST00000563498 SEPT1Q8WYJ6 367 aa21.48■■□□□ 1.03
NME3-204ENST00000563498 CLP1Q92989 425 aaKnown RBP21.48■■□□□ 1.03
NME3-204ENST00000563498 POTEB3A0JP26 581 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 MBLAC1A4D2B0 266 aaPredicted RBP21.47■■□□□ 1.03
NME3-204ENST00000563498 SGSM2O43147 1006 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 DCXO43602 365 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 RPLP2P05387 115 aaKnown RBP21.47■■□□□ 1.03
NME3-204ENST00000563498 GNAQP50148 359 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 ZP2Q05996 745 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 PPFIA1Q13136 1202 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 LPIN1Q14693 890 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 CTC1Q2NKJ3 1217 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 POTEBQ6S5H4 581 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 LY9Q9HBG7 655 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 CLDND1Q9NY35 253 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 TUBE1Q9UJT0 475 aa21.47■■□□□ 1.03
NME3-204ENST00000563498 SUPT16HQ9Y5B9 1047 aaKnown RBP21.47■■□□□ 1.03
NME3-204ENST00000563498 KAT6AQ92794 2004 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 C19orf67A6NJJ6 358 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 ENPP3O14638 875 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 ATP9AO75110 1047 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 LTBRP36941 435 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 GRIK4Q16099 956 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 EP400NLQ6ZTU2 488 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 ADHFE1Q8IWW8 467 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 MAP4K1Q92918 833 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 ZNF689Q96CS4 500 aaPredicted RBP21.46■■□□□ 1.03
NME3-204ENST00000563498 PSTPIP2Q9H939 334 aa21.46■■□□□ 1.03
NME3-204ENST00000563498 GSTTP1A0A1W2PQM5 241 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 MAFGO15525 162 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 ITGB5P18084 799 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 CSPP1Q1MSJ5 1256 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 FBXO47Q5MNV8 452 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 MARCH8Q5T0T0 291 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 TSHZ1Q6ZSZ6 1077 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 TMTC2Q8N394 836 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 MYL10Q9BUA6 226 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 PLVAPQ9BX97 442 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 SMARCAD1Q9H4L7 1026 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 UBIAD1Q9Y5Z9 338 aa21.45■■□□□ 1.02
NME3-204ENST00000563498 SQORQ9Y6N5 450 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms