RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 GHRHRQ02643 423 aa11.75□□□□□ -0.53
SNX29-202ENST00000563308 MYOCDQ8IZQ8 938 aa11.75□□□□□ -0.53
SNX29-202ENST00000563308 KREMEN2Q8NCW0 462 aa11.75□□□□□ -0.53
SNX29-202ENST00000563308 OR6J1Q8NGC5 347 aa11.75□□□□□ -0.53
SNX29-202ENST00000563308 AFAP1L1Q8TED9 768 aa11.75□□□□□ -0.53
SNX29-202ENST00000563308 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
SNX29-202ENST00000563308 NCDNQ9UBB6 729 aa11.75□□□□□ -0.53
SNX29-202ENST00000563308 ANGPTL2Q9UKU9 493 aa11.75□□□□□ -0.53
SNX29-202ENST00000563308 USP15Q9Y4E8 981 aaPredicted RBP11.75□□□□□ -0.53
SNX29-202ENST00000563308 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
SNX29-202ENST00000563308 E7EWF7 191 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 NKRFO15226 690 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNX29-202ENST00000563308 TXNP10599 105 aaKnown RBP11.74□□□□□ -0.53
SNX29-202ENST00000563308 CPT1AP50416 773 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 ANTXR2P58335 489 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 LMNB2Q03252 620 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 TROAPQ12815 778 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 ADAM15Q13444 863 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 GRM4Q14833 912 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 PPP2R5BQ15173 497 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 BRDTQ58F21 947 aaPredicted RBP11.74□□□□□ -0.53
SNX29-202ENST00000563308 DCLK2Q8N568 766 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 SMRP1Q8NCR6 262 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 CAGE1Q8TC20 777 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 NSUN6Q8TEA1 469 aaKnown RBP11.74□□□□□ -0.53
SNX29-202ENST00000563308 RUFY2Q8WXA3 655 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 C11orf84Q9BUA3 381 aaPredicted RBP11.74□□□□□ -0.53
SNX29-202ENST00000563308 SORCS3Q9UPU3 1222 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 MRPL11Q9Y3B7 192 aaKnown RBP11.74□□□□□ -0.53
SNX29-202ENST00000563308 R4GN57 208 aa11.74□□□□□ -0.53
SNX29-202ENST00000563308 ZBTB5O15062 677 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 LINC01565O15544 149 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 CYTH3O43739 400 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 CSPG5O95196 566 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 MYL3P08590 195 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 DMDP11532 3685 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 ATF7P17544 494 aaPredicted RBP11.73□□□□□ -0.53
SNX29-202ENST00000563308 CTNNB1P35222 781 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 HSD17B4P51659 736 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 ARHGAP1Q07960 439 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 COASYQ13057 564 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 CHST3Q7LGC8 479 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 MCF2L2Q86YR7 1114 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 MB21D2Q8IYB1 491 aaPredicted RBP11.73□□□□□ -0.53
SNX29-202ENST00000563308 CCDC105Q8IYK2 499 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 IGDCC4Q8TDY8 1250 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 PPP1R13LQ8WUF5 828 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 MSLNLQ96KJ4 702 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 IWS1Q96ST2 819 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 RMDN3Q96TC7 470 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
SNX29-202ENST00000563308 RTP3Q9BQQ7 232 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 MTG1Q9BT17 334 aaPredicted RBP11.73□□□□□ -0.53
SNX29-202ENST00000563308 AMNQ9BXJ7 453 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 RIOX1Q9H6W3 641 aa11.73□□□□□ -0.53
SNX29-202ENST00000563308 TET1Q8NFU7 2136 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 SCN10AQ9Y5Y9 1956 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 B4DLN1 442 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 IFIT3O14879 490 aaKnown RBP11.72□□□□□ -0.53
SNX29-202ENST00000563308 DHX16O60231 1041 aaKnown RBP11.72□□□□□ -0.53
SNX29-202ENST00000563308 RB1P06400 928 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 SELPP16109 830 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 EIF2AK2P19525 551 aaKnown RBP11.72□□□□□ -0.53
SNX29-202ENST00000563308 KCNA4P22459 653 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 MRPL12P52815 198 aaKnown RBP11.72□□□□□ -0.53
SNX29-202ENST00000563308 TRDNQ13061 729 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 LY6KQ17RY6 165 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 PPM1JQ5JR12 505 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 DTWD2Q8NBA8 298 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 KAT2BQ92831 832 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 CTAGE1Q96RT6 745 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 LSG1Q9H089 658 aaKnown RBP11.72□□□□□ -0.53
SNX29-202ENST00000563308 PXMP2Q9NR77 195 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 RWDD3Q9Y3V2 267 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 NR2E1Q9Y466 385 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 PCDHA1Q9Y5I3 950 aa11.72□□□□□ -0.53
SNX29-202ENST00000563308 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
SNX29-202ENST00000563308 KPNA6O60684 536 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 EIF3JO75822 258 aaKnown RBP11.71□□□□□ -0.53
SNX29-202ENST00000563308 CFBP00751 764 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 NR3C2P08235 984 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 RFX1P22670 979 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.53
SNX29-202ENST00000563308 CHMP4BP1P59074 171 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.53
SNX29-202ENST00000563308 STXBP2Q15833 593 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 SEPT14Q6ZU15 432 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 SKAP1Q86WV1 359 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 NCOA7Q8NI08 942 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 IL31RAQ8NI17 732 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 SP7Q8TDD2 431 aaPredicted RBP11.71□□□□□ -0.53
SNX29-202ENST00000563308 AFG1LQ8WV93 481 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 PIGSQ96S52 555 aa11.71□□□□□ -0.53
SNX29-202ENST00000563308 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.53
SNX29-202ENST00000563308 VPS13AQ96RL7 3174 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 FLNBO75369 2602 aaKnown RBP11.7□□□□□ -0.54
SNX29-202ENST00000563308 STK25O00506 426 aa11.7□□□□□ -0.54
SNX29-202ENST00000563308 ZIC2O95409 532 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms