RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CUL4AQ13619 759 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 MFSD10Q14728 455 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 NONOQ15233 471 aaKnown RBP eCLIP9.71□□□□□ -0.86
UBR1-204ENST00000563239 KIAA0753Q2KHM9 967 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 Q4G0T1 1027 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 PRR16Q569H4 304 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 GDF6Q6KF10 455 aaPredicted RBP9.71□□□□□ -0.86
UBR1-204ENST00000563239 CHRDL2Q6WN34 429 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 PIK3AP1Q6ZUJ8 805 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 TRIM50Q86XT4 487 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 DIS3L2Q8IYB7 885 aaKnown RBP9.71□□□□□ -0.86
UBR1-204ENST00000563239 FBXO18Q8NFZ0 1043 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 SEPT1Q8WYJ6 367 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 SLC5A5Q92911 643 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 GJA10Q969M2 543 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 JPH1Q9HDC5 661 aaPredicted RBP9.71□□□□□ -0.86
UBR1-204ENST00000563239 PRDM5Q9NQX1 630 aaPredicted RBP9.71□□□□□ -0.86
UBR1-204ENST00000563239 TMEM39AQ9NV64 488 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 HDAC6Q9UBN7 1215 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 SLC9A2Q9UBY0 812 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 COLQQ9Y215 455 aaPredicted RBP9.71□□□□□ -0.86
UBR1-204ENST00000563239 MROH7Q68CQ1 1323 aa9.71□□□□□ -0.86
UBR1-204ENST00000563239 IGKV6D-21A0A0A0MT36 114 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 CCDC194A0A1B0GVG4 234 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 SPDYE4A6NLX3 237 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 H3BRB1 525 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 NOP56O00567 594 aaKnown RBP9.7□□□□□ -0.86
UBR1-204ENST00000563239 SLC37A4O43826 429 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 TIMP1P01033 207 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 CYP2C9P11712 490 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 BMP8BP34820 402 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 TCF7P36402 384 aaPredicted RBP9.7□□□□□ -0.86
UBR1-204ENST00000563239 ACTR2P61160 394 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 ZNF200P98182 395 aaPredicted RBP9.7□□□□□ -0.86
UBR1-204ENST00000563239 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
UBR1-204ENST00000563239 SETQ01105 290 aaPredicted RBP9.7□□□□□ -0.86
UBR1-204ENST00000563239 UTP14CQ5TAP6 766 aaKnown RBP9.7□□□□□ -0.86
UBR1-204ENST00000563239 MOXD1Q6UVY6 613 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 ABHD15Q6UXT9 468 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 ETNPPLQ8TBG4 499 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 BADQ92934 168 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 VWCEQ96DN2 955 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 SDF4Q9BRK5 362 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 ZNF577Q9BSK1 485 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 RNPEPQ9H4A4 650 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 TUT1Q9H6E5 874 aaKnown RBP9.7□□□□□ -0.86
UBR1-204ENST00000563239 GTF2IRD1Q9UHL9 959 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 UMODL1Q5DID0 1318 aa9.7□□□□□ -0.86
UBR1-204ENST00000563239 LAMA3Q16787 3333 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 KIF28PB7ZC32 967 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 RBAK-RBAKDNI3L0D1 243 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 DDX39AO00148 427 aaKnown RBP9.69□□□□□ -0.86
UBR1-204ENST00000563239 TLR3O15455 904 aaKnown RBP9.69□□□□□ -0.86
UBR1-204ENST00000563239 PSMD10O75832 226 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 SMIM10L2AP0DMW4 78 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 SMIM10L2BP0DMW5 78 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 EPHB4P54760 987 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 CHMP4BP1P59074 171 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 ADAM17P78536 824 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 LETM2Q2VYF4 491 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 FAM47CQ5HY64 1035 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 PPP4R3AQ6IN85 833 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 B3GNT9Q6UX72 402 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 EMSYQ7Z589 1322 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 NEK8Q86SG6 692 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 DHX38Q92620 1227 aaKnown RBP9.69□□□□□ -0.86
UBR1-204ENST00000563239 WNT8BQ93098 351 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 NOC4LQ9BVI4 516 aaKnown RBP9.69□□□□□ -0.86
UBR1-204ENST00000563239 KATNAL1Q9BW62 490 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 WNT8AQ9H1J5 351 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 TBC1D22BQ9NU19 505 aa9.69□□□□□ -0.86
UBR1-204ENST00000563239 SUPT20HL2P0C7V6 817 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 RAG1P15918 1043 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 ATP4AP20648 1035 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 GJB2P29033 226 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 CYP2C18P33260 490 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 FXR1P51114 621 aaKnown RBP eCLIP9.68□□□□□ -0.86
UBR1-204ENST00000563239 TRIM29Q14134 588 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 PTGISQ16647 500 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 TRIM71Q2Q1W2 868 aaKnown RBP9.68□□□□□ -0.86
UBR1-204ENST00000563239 MFSD5Q6N075 450 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 ZNF746Q6NUN9 644 aaPredicted RBP9.68□□□□□ -0.86
UBR1-204ENST00000563239 C16orf59Q7L2K0 433 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 CCDC60Q8IWA6 550 aaPredicted RBP9.68□□□□□ -0.86
UBR1-204ENST00000563239 C7orf31Q8N865 590 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 FAM184AQ8NB25 1140 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 HAS1Q92839 578 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 RIT2Q99578 217 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 PPP1R12CQ9BZL4 782 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 UNC45AQ9H3U1 944 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 SMARCAD1Q9H4L7 1026 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 BRMS1Q9HCU9 246 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 KCNMB3Q9NPA1 279 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 PRKAG2Q9UGJ0 569 aa9.68□□□□□ -0.86
UBR1-204ENST00000563239 DDX25Q9UHL0 483 aaKnown RBP9.68□□□□□ -0.86
UBR1-204ENST00000563239 CCNT1O60563 726 aaKnown RBP9.67□□□□□ -0.86
UBR1-204ENST00000563239 GCFC2P16383 781 aaKnown RBP9.67□□□□□ -0.86
UBR1-204ENST00000563239 U2AF2P26368 475 aaKnown RBP eCLIP9.67□□□□□ -0.863e-6■■■■■ 26.9
UBR1-204ENST00000563239 MARK3P27448 753 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms