RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 L2HGDHQ9H9P8 463 aa21.2■□□□□ 0.99
SMPD3-203ENST00000563226 PPP1R9AQ9ULJ8 1098 aa21.2■□□□□ 0.99
SMPD3-203ENST00000563226 LUC7L2Q9Y383 392 aaKnown RBP21.2■□□□□ 0.99
SMPD3-203ENST00000563226 RPTORQ8N122 1335 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 PHIPQ8WWQ0 1821 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 ZBTB39O15060 712 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 GAS7O60861 476 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 SLITRK3O94933 977 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 ITGB5P18084 799 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 NCBP1Q09161 790 aaKnown RBP21.2■□□□□ 0.98
SMPD3-203ENST00000563226 FOXR2Q6PJQ5 311 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 CYP26C1Q6V0L0 522 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 SFR1Q86XK3 245 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 ERGIC2Q96RQ1 377 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 WRNIP1Q96S55 665 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 DNAJC7Q99615 494 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 IRX2Q9BZI1 471 aaPredicted RBP21.2■□□□□ 0.98
SMPD3-203ENST00000563226 KCTD10Q9H3F6 313 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 UNC45AQ9H3U1 944 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 RABGAP1Q9Y3P9 1069 aa21.2■□□□□ 0.98
SMPD3-203ENST00000563226 COL11A1P12107 1806 aaPredicted RBP21.19■□□□□ 0.98
SMPD3-203ENST00000563226 EYA4O95677 639 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 MAN2A1Q16706 1144 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 WDR59Q6PJI9 974 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 TPH2Q8IWU9 490 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 SCYL3Q8IZE3 742 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 OR8K1Q8NGG5 319 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 NDST4Q9H3R1 872 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 LZTFL1Q9NQ48 299 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 WRAP73Q9P2S5 460 aaPredicted RBP21.19■□□□□ 0.98
SMPD3-203ENST00000563226 ZNF112Q9UJU3 913 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 RLFQ13129 1914 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 TRAF5O00463 557 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 FGFR1OPO95684 399 aaKnown RBP21.19■□□□□ 0.98
SMPD3-203ENST00000563226 TRIM21P19474 475 aaKnown RBP21.19■□□□□ 0.98
SMPD3-203ENST00000563226 GNG11P61952 73 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 DCAF15Q66K64 600 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 PCMTD1Q96MG8 357 aaPredicted RBP21.19■□□□□ 0.98
SMPD3-203ENST00000563226 MXRA8Q9BRK3 442 aa21.19■□□□□ 0.98
SMPD3-203ENST00000563226 DICER1Q9UPY3 1922 aaKnown RBP21.18■□□□□ 0.98
SMPD3-203ENST00000563226 FKBP3Q00688 224 aaKnown RBP21.18■□□□□ 0.98
SMPD3-203ENST00000563226 SETQ01105 290 aaPredicted RBP21.18■□□□□ 0.98
SMPD3-203ENST00000563226 FKBP15Q5T1M5 1219 aa21.18■□□□□ 0.98
SMPD3-203ENST00000563226 LRRN4CLQ8ND94 238 aa21.18■□□□□ 0.98
SMPD3-203ENST00000563226 TUFT1Q9NNX1 390 aa21.18■□□□□ 0.98
SMPD3-203ENST00000563226 GGA3Q9NZ52 723 aa21.18■□□□□ 0.98
SMPD3-203ENST00000563226 PKD2L1Q9P0L9 805 aa21.18■□□□□ 0.98
SMPD3-203ENST00000563226 POLR2AP24928 1970 aaKnown RBP21.18■□□□□ 0.98
SMPD3-203ENST00000563226 SSC5DA1L4H1 1573 aa21.18■□□□□ 0.98
SMPD3-203ENST00000563226 PTPRAP18433 802 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 GHRHRQ02643 423 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 B3GNT9Q6UX72 402 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 GPRC5DQ9NZD1 345 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 SIK3Q9Y2K2 1263 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 DDX39AO00148 427 aaKnown RBP21.17■□□□□ 0.98
SMPD3-203ENST00000563226 IPO5O00410 1097 aaKnown RBP21.17■□□□□ 0.98
SMPD3-203ENST00000563226 EPHB6O15197 1021 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 ABL1P00519 1130 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 MYBP10242 640 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 HIRAP54198 1017 aaPredicted RBP21.17■□□□□ 0.98
SMPD3-203ENST00000563226 BACE1P56817 501 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 RINT1Q6NUQ1 792 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 APOBEC3FQ8IUX4 373 aaKnown RBP21.17■□□□□ 0.98
SMPD3-203ENST00000563226 SYTL5Q8TDW5 730 aaPredicted RBP21.17■□□□□ 0.98
SMPD3-203ENST00000563226 ATG4CQ96DT6 458 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 WDR11Q9BZH6 1224 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMPD3-203ENST00000563226 COL4A3BPQ9Y5P4 624 aa21.17■□□□□ 0.98
SMPD3-203ENST00000563226 V9GYY5 206 aaPredicted RBP21.17■□□□□ 0.98
SMPD3-203ENST00000563226 HOXD13P35453 343 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 USP14P54578 494 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 MCF2L2Q86YR7 1114 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 CCDC155Q8N6L0 562 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 ANKRD7Q92527 254 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 NUP58Q9BVL2 599 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 TEKT3Q9BXF9 490 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 REXO2Q9Y3B8 237 aaKnown RBP21.16■□□□□ 0.98
SMPD3-203ENST00000563226 SLU7O95391 586 aaKnown RBP21.16■□□□□ 0.98
SMPD3-203ENST00000563226 EPS15P42566 896 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 MRPS9P82933 396 aaKnown RBP21.16■□□□□ 0.98
SMPD3-203ENST00000563226 EPM2AIP1Q7L775 607 aaPredicted RBP21.16■□□□□ 0.98
SMPD3-203ENST00000563226 RETREG2Q8NC44 543 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 ZNF280CQ8ND82 737 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 TAAR1Q96RJ0 339 aa21.16■□□□□ 0.98
SMPD3-203ENST00000563226 VWA5AO00534 786 aa21.15■□□□□ 0.98
SMPD3-203ENST00000563226 RPS6P62753 249 aaKnown RBP21.15■□□□□ 0.98
SMPD3-203ENST00000563226 MEA1Q16626 185 aa21.15■□□□□ 0.98
SMPD3-203ENST00000563226 PURBQ96QR8 312 aaKnown RBP21.15■□□□□ 0.98
SMPD3-203ENST00000563226 PICK1Q9NRD5 415 aa21.15■□□□□ 0.98
SMPD3-203ENST00000563226 KCNH7Q9NS40 1196 aa21.15■□□□□ 0.98
SMPD3-203ENST00000563226 SBF1O95248 1867 aa21.15■□□□□ 0.98
SMPD3-203ENST00000563226 SFI1A8K8P3 1242 aa21.14■□□□□ 0.98
SMPD3-203ENST00000563226 URI1O94763 535 aaPredicted RBP21.14■□□□□ 0.98
SMPD3-203ENST00000563226 PRPF6O94906 941 aaKnown RBP21.14■□□□□ 0.98
SMPD3-203ENST00000563226 EIF2AK2P19525 551 aaKnown RBP21.14■□□□□ 0.98
SMPD3-203ENST00000563226 HMGCS2P54868 508 aa21.14■□□□□ 0.98
SMPD3-203ENST00000563226 ZBED6P86452 979 aa21.14■□□□□ 0.98
SMPD3-203ENST00000563226 CCDC40Q4G0X9 1142 aa21.14■□□□□ 0.98
SMPD3-203ENST00000563226 FIGNQ5HY92 759 aa21.14■□□□□ 0.98
SMPD3-203ENST00000563226 ARHGAP27Q6ZUM4 889 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms