RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ALG1Q9BT22 464 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 C11orf84Q9BUA3 381 aaPredicted RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 TMX1Q9H3N1 280 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 CLDND1Q9NY35 253 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 MAGEC2Q9UBF1 373 aaPredicted RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 PCDHA8Q9Y5H6 950 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 RASGRP1O95267 797 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 NPTXRO95502 500 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 ASLP04424 464 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 HMGB1P09429 215 aaKnown RBP4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 KCNA6P17658 529 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 SDSP20132 328 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 FPR2P25090 351 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 SLC6A11P48066 632 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 TM4SF20Q53R12 229 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 HABP4Q5JVS0 413 aaKnown RBP4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 CD300LDQ6UXZ3 194 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 KYQ8NBH2 561 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 PCDH19Q8TAB3 1148 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 SEC14L1Q92503 715 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 MFSD3Q96ES6 412 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 TRMT2BQ96GJ1 504 aaKnown RBP4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 CHAMP1Q96JM3 812 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 SLKQ9H2G2 1235 aaPredicted RBP4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 BTG4Q9NY30 223 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 PPARGC1AQ9UBK2 798 aaKnown RBP4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 PCDHA9Q9Y5H5 950 aa4.68□□□□□ -1.66
SHCBP1-202ENST00000563219 B4E1Z4 1266 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 FAM47E-STBD1D6RA91 191 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 K7ESM1 405 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 APPP05067 770 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 CKMP06732 381 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 POU3F2P20265 443 aaPredicted RBP4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 RPL13P26373 211 aaKnown RBP4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 CNR2P34972 360 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 IGFALSP35858 605 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 C21orf62-AS1Q17RA5 79 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 EMC4Q5J8M3 183 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 HHIPL2Q6UWX4 724 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 MILR1Q7Z6M3 343 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 FAM26EQ8N5C1 309 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 ADAMTS17Q8TE56 1095 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 BORCS6Q96GS4 357 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 SYT3Q9BQG1 590 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 EPB41L1Q9H4G0 881 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 IPPKQ9H8X2 491 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 PALD1Q9ULE6 856 aa4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 COA3Q9Y2R0 106 aaPredicted RBP4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 TNPO3Q9Y5L0 923 aaKnown RBP4.67□□□□□ -1.66
SHCBP1-202ENST00000563219 SBNO2Q9Y2G9 1366 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 FAM83GA6ND36 823 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 DGKIO75912 1065 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 ITGB3P05106 788 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 THBS2P35442 1172 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 KIAA2012Q0VF49 1180 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 CHRNA2Q15822 529 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 ZXDCQ2QGD7 858 aaPredicted RBP4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 ABHD17CQ6PCB6 329 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 C16orf59Q7L2K0 433 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 OTOP3Q7RTS5 596 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 ZC3H18Q86VM9 953 aaKnown RBP4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 DHX37Q8IY37 1157 aaKnown RBP4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 TTLL6Q8N841 843 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 FBXW5Q969U6 566 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 RBM15Q96T37 977 aaKnown RBP eCLIP4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 JAM3Q9BX67 310 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 CELF4Q9BZC1 486 aaKnown RBP4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 NGRNQ9NPE2 291 aaKnown RBP4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 PRKAB1Q9Y478 270 aa4.66□□□□□ -1.66
SHCBP1-202ENST00000563219 A0A087X0B3 334 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 GSTA4O15217 222 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 TADA3O75528 432 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 SPIRE1Q08AE8 756 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 RGL3Q3MIN7 710 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 FAM26FQ5R3K3 315 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 PRR31Q5SQ13 230 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 CYP4F22Q6NT55 531 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 ZCCHC8Q6NZY4 707 aaKnown RBP4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 STK32CQ86UX6 486 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 LRRTM3Q86VH5 581 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 ZC3H7AQ8IWR0 971 aaKnown RBP4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 FAM126BQ8IXS8 530 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 ORAI3Q9BRQ5 295 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 PDGFDQ9GZP0 370 aaPredicted RBP4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 SLC6A20Q9NP91 592 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 ZNF652Q9Y2D9 606 aa4.65□□□□□ -1.67
SHCBP1-202ENST00000563219 CCDC66A2RUB6 948 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 GSG1L2A8MUP6 293 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 KRIT1O00522 736 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 OPA1O60313 960 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 VIL1P09327 827 aaKnown RBP4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 SRGAP2CP0DJJ0 459 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 FLT3P36888 993 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 MAGEA10P43363 369 aaPredicted RBP4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 MASP1P48740 699 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 ITGA1P56199 1179 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 LACTBP83111 547 aaPredicted RBP4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 ZNF460Q14592 562 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms