RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 HERC4Q5GLZ8 1057 aaPredicted RBP14.39□□□□□ -0.11
USB1-207ENST00000563149 FOXR1Q6PIV2 292 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 FRMD5Q7Z6J6 570 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 GPBP1Q86WP2 473 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 C1orf131Q8NDD1 294 aaKnown RBP14.39□□□□□ -0.11
USB1-207ENST00000563149 SCFD1Q8WVM8 642 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 TBC1D5Q92609 795 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 CAPS2Q9BXY5 557 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 GANQ9H2C0 597 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 TRAF3IP3Q9Y228 551 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 MYH10P35580 1976 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 MYH7BA7E2Y1 1941 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 THSD7AQ9UPZ6 1657 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 SSBP05455 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
USB1-207ENST00000563149 SHMT1P34896 483 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 EPS15P42566 896 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 IRAK1P51617 712 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 GTF2IP78347 998 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 TTBK2Q6IQ55 1244 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 CD302Q8IX05 232 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 SP8Q8IXZ3 490 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 KCTD17Q8N5Z5 321 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 MXD3Q9BW11 206 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 EHD4Q9H223 541 aa14.39□□□□□ -0.11
USB1-207ENST00000563149 LTBP4Q8N2S1 1624 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 LTBP1Q14766 1721 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 KIF13BQ9NQT8 1826 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 ARFGEF1Q9Y6D6 1849 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 C6orf229H3BNL8 230 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 KLRC1P26715 233 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 SLC12A3P55017 1021 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 EIF6P56537 245 aaKnown RBP14.38□□□□□ -0.11
USB1-207ENST00000563149 TNNC1P63316 161 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 KCNH2Q12809 1159 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 RAPGEF1Q13905 1077 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 ERMNQ8TAM6 284 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 WHAMMQ8TF30 809 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 DCAF4Q8WV16 495 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 ZBTB9Q96C00 473 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 NGLY1Q96IV0 654 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 DHX36Q9H2U1 1008 aaKnown RBP14.38□□□□□ -0.11
USB1-207ENST00000563149 FBXL5Q9UKA1 691 aa14.38□□□□□ -0.11
USB1-207ENST00000563149 KLRG2A4D1S0 409 aaPredicted RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 USP17L10C9JJH3 530 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 TRIM66O15016 1216 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 KRT18P05783 430 aaKnown RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 CDC37Q16543 378 aaPredicted RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 KIAA0753Q2KHM9 967 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 EMC10Q5UCC4 262 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 HHIPL2Q6UWX4 724 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 NELFCDQ8IXH7 590 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 TSEN2Q8NCE0 465 aaKnown RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 TAF4BQ92750 862 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 MKL1Q969V6 931 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 PBKQ96KB5 322 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 INPP4AQ96PE3 977 aaPredicted RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 PSMB7Q99436 277 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 ANO3Q9BYT9 981 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 DDX4Q9NQI0 724 aaKnown RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 USP40Q9NVE5 1235 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 EHD2Q9NZN4 543 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 A0A087X0T9 212 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 POTEB3A0JP26 581 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 POTECB2RU33 542 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 PDXKO00764 312 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 EIF3HO15372 352 aaKnown RBP eCLIP14.37□□□□□ -0.11
USB1-207ENST00000563149 CALUO43852 315 aaPredicted RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 HEXIM1O94992 359 aaKnown RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 FAM228BP0C875 321 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 PRKCIP41743 596 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 Q4G0T1 1027 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 POTEBQ6S5H4 581 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 EFCAB13Q8IY85 973 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 IQCKQ8N0W5 287 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 PPM1EQ8WY54 764 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.37□□□□□ -0.11
USB1-207ENST00000563149 METTL14Q9HCE5 456 aaKnown RBP14.37□□□□□ -0.11
USB1-207ENST00000563149 SMARCAL1Q9NZC9 954 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 TBC1D7Q9P0N9 293 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 TMEM59LQ9UK28 342 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 HDAC9Q9UKV0 1011 aa14.37□□□□□ -0.11
USB1-207ENST00000563149 SHTN1A0MZ66 631 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 MED24O75448 989 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 AFPP02771 609 aaKnown RBP14.36□□□□□ -0.11
USB1-207ENST00000563149 GYS1P13807 737 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 NR2F2P24468 414 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 RPA1P27694 616 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 KNOP1Q1ED39 458 aaKnown RBP14.36□□□□□ -0.11
USB1-207ENST00000563149 ARSHQ5FYA8 562 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
USB1-207ENST00000563149 IRF2BP2Q7Z5L9 587 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 FAM133AQ8N9E0 248 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 USP38Q8NB14 1042 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 MS4A14Q96JA4 679 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 ZIM3Q96PE6 472 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 FGFBP2Q9BYJ0 223 aa14.36□□□□□ -0.11
USB1-207ENST00000563149 EPB41L5Q9HCM4 733 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms