RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 CRIPAKQ8N1N5 446 aa9.72□□□□□ -0.85
CKLF-208ENST00000563092 APBB2Q92870 758 aa9.72□□□□□ -0.85
CKLF-208ENST00000563092 ZNF689Q96CS4 500 aaPredicted RBP9.72□□□□□ -0.85
CKLF-208ENST00000563092 IL17RAQ96F46 866 aa9.72□□□□□ -0.85
CKLF-208ENST00000563092 PRRX2Q99811 253 aa9.72□□□□□ -0.85
CKLF-208ENST00000563092 PDCD2LQ9BRP1 358 aa9.72□□□□□ -0.85
CKLF-208ENST00000563092 C11orf84Q9BUA3 381 aaPredicted RBP9.72□□□□□ -0.85
CKLF-208ENST00000563092 UBA5Q9GZZ9 404 aa9.72□□□□□ -0.85
CKLF-208ENST00000563092 MAP3K20Q9NYL2 800 aaKnown RBP9.72□□□□□ -0.85
CKLF-208ENST00000563092 MRPL11Q9Y3B7 192 aaKnown RBP9.72□□□□□ -0.85
CKLF-208ENST00000563092 NLRC5Q86WI3 1866 aa9.71□□□□□ -0.85
CKLF-208ENST00000563092 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 LOC730098B7Z3J9 87 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 H3BRB1 525 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 TREHO43280 583 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 MMP1P03956 469 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 SMIM10L2AP0DMW4 78 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 SMIM10L2BP0DMW5 78 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 EIF2AK2P19525 551 aaKnown RBP9.71□□□□□ -0.86
CKLF-208ENST00000563092 MX1P20591 662 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 UBA1P22314 1058 aaKnown RBP9.71□□□□□ -0.86
CKLF-208ENST00000563092 ADAM15Q13444 863 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 QRICH1Q2TAL8 776 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.86
CKLF-208ENST00000563092 TRIM67Q6ZTA4 783 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 SAMD3Q8N6K7 520 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 ATP6V0A1Q93050 837 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 EVI5LQ96CN4 794 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 MTMR8Q96EF0 704 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 SPATA33Q96N06 139 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 IFIH1Q9BYX4 1025 aaKnown RBP9.71□□□□□ -0.86
CKLF-208ENST00000563092 RNPEPQ9H4A4 650 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 TUT1Q9H6E5 874 aaKnown RBP9.71□□□□□ -0.86
CKLF-208ENST00000563092 EHMT1Q9H9B1 1298 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 JMJD4Q9H9V9 463 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 RWDD3Q9Y3V2 267 aa9.71□□□□□ -0.86
CKLF-208ENST00000563092 A0A0D9SFI3 127 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 TMEM221A6NGB7 291 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 M0R296 226 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 STXBP3O00186 592 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 GGPS1O95749 300 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 LGALS2P05162 132 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 GTF2F1P35269 517 aaKnown RBP eCLIP9.7□□□□□ -0.86
CKLF-208ENST00000563092 COASYQ13057 564 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 PGM5Q15124 567 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 MCMDC2Q4G0Z9 681 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 ASPRV1Q53RT3 343 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 MFSD6Q6ZSS7 791 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
CKLF-208ENST00000563092 FIBCD1Q8N539 461 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 SMRP1Q8NCR6 262 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 PNMA1Q8ND90 353 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 IL31RAQ8NI17 732 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 FAM227BQ96M60 508 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 PLVAPQ9BX97 442 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 TOMM22Q9NS69 142 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 CLEC1BQ9P126 229 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 CD207Q9UJ71 328 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 PCDHGA4Q9Y5G9 962 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 ADGRA3Q8IWK6 1321 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 DMDP11532 3685 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 KMT2EQ8IZD2 1858 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 CACNA1HO95180 2353 aa9.7□□□□□ -0.86
CKLF-208ENST00000563092 ZFHX2Q9C0A1 2572 aaPredicted RBP9.69□□□□□ -0.86
CKLF-208ENST00000563092 LINC01565O15544 149 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 PPP1R11O60927 126 aaPredicted RBP9.69□□□□□ -0.86
CKLF-208ENST00000563092 UPP2O95045 317 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 CHRNA1P02708 482 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 ICAM3P32942 547 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 CTNNB1P35222 781 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 NEDD4P46934 1319 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 ZXDAP98168 799 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 MGAT3Q09327 533 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 MYO7AQ13402 2215 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 FRMPD4Q14CM0 1322 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 NAALADL2Q58DX5 795 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 FBXL6Q8N531 539 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 EFHBQ8N7U6 833 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 ESR2Q92731 530 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
CKLF-208ENST00000563092 P2RX5Q93086 422 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 ASIC4Q96FT7 647 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 USP26Q9BXU7 913 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 BCAS3Q9H6U6 928 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 RCAN3Q9UKA8 241 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 PLAGL2Q9UPG8 496 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 LHX6Q9UPM6 363 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 DCHS1Q96JQ0 3298 aa9.69□□□□□ -0.86
CKLF-208ENST00000563092 PROB1E7EW31 1015 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 ENPP3O14638 875 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 DGKIO75912 1065 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 CFBP00751 764 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 DNAJB1P25685 340 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 HAND2P61296 217 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 FOXK2Q01167 660 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 CLUL1Q15846 466 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 CCDC178Q5BJE1 867 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 EP400NLQ6ZTU2 488 aa9.68□□□□□ -0.86
CKLF-208ENST00000563092 ENAHQ8N8S7 591 aaPredicted RBP9.68□□□□□ -0.86
CKLF-208ENST00000563092 TMC2Q8TDI7 906 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms