RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 LAD1O00515 517 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 SFNP31947 248 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 MIS18BP1Q6P0N0 1132 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 ABHD15Q6UXT9 468 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 RDM1Q8NG50 284 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 C16orf70Q9BSU1 422 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 SMARCAD1Q9H4L7 1026 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 TUT1Q9H6E5 874 aaKnown RBP18.47■□□□□ 0.55
USB1-206ENST00000562534 AZI2Q9H6S1 392 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 PCDHB6Q9Y5E3 794 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 A0A0U1RQG5 324 aaPredicted RBP18.46■□□□□ 0.55
USB1-206ENST00000562534 WDR64B1ANS9 1081 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 WNT7AO00755 349 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 CCNE2O96020 404 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 LGALS2P05162 132 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 PSAPP07602 524 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 ZSCAN22P10073 491 aaPredicted RBP18.46■□□□□ 0.55
USB1-206ENST00000562534 JAK3P52333 1124 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 RESTQ13127 1097 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 ITGA7Q13683 1181 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 PLPPR4Q7Z2D5 763 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 GLG1Q92896 1179 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 TNPO1Q92973 898 aaKnown RBP18.46■□□□□ 0.55
USB1-206ENST00000562534 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.46■□□□□ 0.55
USB1-206ENST00000562534 ZNF215Q9UL58 517 aaPredicted RBP18.46■□□□□ 0.55
USB1-206ENST00000562534 SAMM50Q9Y512 469 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
USB1-206ENST00000562534 IGKV6D-21A0A0A0MT36 114 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 ARVCFO00192 962 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 LGR5O75473 907 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 BMP15O95972 392 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 F2P00734 622 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 TXKP42681 527 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 SLC26A2P50443 739 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 CDK7P50613 346 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 STAT5BP51692 787 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 PTGDRQ13258 359 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 PPP2R5CQ13362 524 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 UTP14CQ5TAP6 766 aaKnown RBP18.45■□□□□ 0.54
USB1-206ENST00000562534 FAM160B1Q5W0V3 765 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 B3GNT9Q6UX72 402 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 C4orf32Q8N8J7 132 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 SLC43A3Q8NBI5 491 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 KAT2BQ92831 832 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 GJA10Q969M2 543 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 TTC12Q9H892 705 aaPredicted RBP18.45■□□□□ 0.54
USB1-206ENST00000562534 DISC1Q9NRI5 854 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 ERAP1Q9NZ08 941 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 CEP131Q9UPN4 1083 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 TELO2Q9Y4R8 837 aa18.45■□□□□ 0.54
USB1-206ENST00000562534 HAS3O00219 553 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 OR52Z1P0C646 297 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 SUPT20HL2P0C7V6 817 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 PSEN2P49810 448 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 ATN1P54259 1190 aaPredicted RBP18.44■□□□□ 0.54
USB1-206ENST00000562534 PTPN11Q06124 597 aaPredicted RBP18.44■□□□□ 0.54
USB1-206ENST00000562534 MFSD10Q14728 455 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 NBPF20Q3BBV1 942 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 SWSAP1Q6NVH7 229 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 NFRKBQ6P4R8 1299 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 MIER3Q7Z3K6 550 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 TMEM60Q9H2L4 133 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 UNC45AQ9H3U1 944 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 MROH7Q68CQ1 1323 aa18.44■□□□□ 0.54
USB1-206ENST00000562534 BACH1O14867 736 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 ZNF286BP0CG31 522 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 PRPHP41219 470 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 PSMC6P62333 389 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 PDIA5Q14554 519 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 NBR1Q14596 966 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 SNX17Q15036 470 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 KIAA0753Q2KHM9 967 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 C7orf31Q8N865 590 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 AFAP1L1Q8TED9 768 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 TOX2Q96NM4 488 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 ZNF302Q9NR11 478 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 GRIN2DO15399 1336 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 EMSYQ7Z589 1322 aa18.43■□□□□ 0.54
USB1-206ENST00000562534 CHMP2AO43633 222 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 F13A1P00488 732 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 CHMP4BP1P59074 171 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 EPHA7Q15375 998 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 LRRC26Q2I0M4 334 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 TMEM266Q2M3C6 531 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 ANKRD33Q7Z3H0 272 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 SESTD1Q86VW0 696 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 DPF3Q92784 378 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 ZNF396Q96N95 335 aaPredicted RBP18.42■□□□□ 0.54
USB1-206ENST00000562534 PCYT2Q99447 389 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 VAV3Q9UKW4 847 aa18.42■□□□□ 0.54
USB1-206ENST00000562534 RBM19Q9Y4C8 960 aaKnown RBP18.42■□□□□ 0.54
USB1-206ENST00000562534 MAFBQ9Y5Q3 323 aaPredicted RBP18.42■□□□□ 0.54
USB1-206ENST00000562534 DCDC2CA8MYV0 355 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 DKC1O60832 514 aaKnown RBP eCLIP18.41■□□□□ 0.541e-5■■■■□ 25.7
USB1-206ENST00000562534 BRD1O95696 1058 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 TECP42680 631 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 NUCB2P80303 420 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 SF3A1Q15459 793 aaKnown RBP18.41■□□□□ 0.54
USB1-206ENST00000562534 ARL6IP4Q66PJ3 421 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms