RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 IGLV3-22A0A075B6J6 115 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 MEIS1O00470 390 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 FOSP01100 380 aaPredicted RBP12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 MYOGP15173 224 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 SELPP16109 830 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 ARHGAP4P98171 946 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 SCRN1Q12765 414 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 PTK7Q13308 1070 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 AP3B2Q13367 1082 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 BFSP2Q13515 415 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 GRIN2CQ14957 1233 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 CEP55Q53EZ4 464 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 LRRC8DQ7L1W4 858 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 SERINC5Q86VE9 423 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 RPUSD2Q8IZ73 545 aaKnown RBP12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 AFAP1L1Q8TED9 768 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 ZNF274Q96GC6 653 aaPredicted RBP12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 AGO4Q9HCK5 861 aaKnown RBP12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 TPCN1Q9ULQ1 816 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 EVPLQ92817 2033 aa12.67□□□□□ -0.38
LPCAT4-202ENST00000562404 UNC80Q8N2C7 3258 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 C17orf102A2RUQ5 167 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 ZBBXA8MT70 800 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 MARK3P27448 753 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 NPY5RQ15761 445 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 TMCO2Q7Z6W1 182 aaPredicted RBP12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 GIMAP8Q8ND71 665 aaPredicted RBP12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 LMBR1Q8WVP7 490 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 SEPT1Q8WYJ6 367 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 ATP6V0A1Q93050 837 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 TIFAQ96CG3 184 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 ZBTB10Q96DT7 871 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 IL17RAQ96F46 866 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 CDHR1Q96JP9 859 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 EHMT1Q9H9B1 1298 aa12.66□□□□□ -0.38
LPCAT4-202ENST00000562404 MAFGO15525 162 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 DHX15O43143 795 aaKnown RBP12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 LGR5O75473 907 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 ARHGEF15O94989 841 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 LARGE1O95461 756 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 CTDNEP1O95476 244 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 CCNE2O96020 404 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 CXCL10P02778 98 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 PFKMP08237 780 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 CYP3A4P08684 503 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 RFC2P35250 354 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 AK2P54819 239 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 REXO1Q8N1G1 1221 aaKnown RBP12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 LENG9Q96B70 501 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 FTOQ9C0B1 505 aaKnown RBP eCLIP12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 GLT8D2Q9H1C3 349 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 NKX2-4Q9H2Z4 354 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 ZNF576Q9H609 170 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 C6orf50Q9HD87 102 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 JPH1Q9HDC5 661 aaPredicted RBP12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 SLC9A2Q9UBY0 812 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 SLC4A7Q9Y6M7 1214 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 REV3LO60673 3130 aa12.65□□□□□ -0.38
LPCAT4-202ENST00000562404 NFASCO94856 1347 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 M0R2N6 131 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 DDX39AO00148 427 aaKnown RBP12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 CTSHP09668 335 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 THPOP40225 353 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 ANAPC15P60006 121 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 ACTR2P61160 394 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 DEFB103AP81534 67 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 SSRP1Q08945 709 aaKnown RBP12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 MARCH8Q5T0T0 291 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 RUFY4Q6ZNE9 571 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 SPRED2Q7Z698 418 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 CCDC155Q8N6L0 562 aa12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 ZNF215Q9UL58 517 aaPredicted RBP12.64□□□□□ -0.39
LPCAT4-202ENST00000562404 EMSYQ7Z589 1322 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 TMEM265A0A087WTH1 108 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 PFKFB2O60825 505 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 ATG7O95352 703 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 DEXIO95424 95 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 ATP2A2P16615 1042 aaKnown RBP12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 GNA11P29992 359 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 ZNF76P36508 570 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 NLRP5P59047 1200 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 NIPA1Q7RTP0 329 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 CCDC12Q8WUD4 166 aaPredicted RBP12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 GJA10Q969M2 543 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 MTIF3Q9H2K0 278 aaKnown RBP12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
LPCAT4-202ENST00000562404 IGKV6D-21A0A0A0MT36 114 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 RSPH10B2B2RC85 870 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 CPLX1O14810 134 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 RSPH10BP0C881 870 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms