RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ESYT1Q9BSJ8 1104 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 PSTPIP2Q9H939 334 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 COL4A6Q14031 1691 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 hCG_1642624A0A1W2PR95 340 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 TCF7P36402 384 aaPredicted RBP19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 ARHGAP4P98171 946 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 UBE2SQ16763 222 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 FAM26DQ5JW98 314 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 CREB3L3Q68CJ9 461 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 TOP1MTQ969P6 601 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 GPRASP2Q96D09 838 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 LRRC2Q9BYS8 371 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 RAPGEFL1Q9UHV5 662 aa19.2■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 CALM1P0DP23 149 aa19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 CALM2P0DP24 149 aa19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 CALM3P0DP25 149 aa19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 TMTC3Q6ZXV5 915 aa19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 CCDC82Q8N4S0 544 aa19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 GIMAP8Q8ND71 665 aaPredicted RBP19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 FBXO22Q8NEZ5 403 aa19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 SLC12A7Q9Y666 1083 aa19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 NRCAMQ92823 1304 aa19.19■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 GSTTP1A0A1W2PQM5 241 aa19.18■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 UPP2O95045 317 aa19.18■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 CHRNA1P02708 482 aa19.18■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 RUFY4Q6ZNE9 571 aa19.18■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 UBIAD1Q9Y5Z9 338 aa19.18■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 MARK3P27448 753 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 MTMR1Q13613 665 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 EPC2Q52LR7 807 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 SGMS1Q86VZ5 419 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 FANCBQ8NB91 859 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 APBB2Q92870 758 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 CDHR1Q96JP9 859 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 YME1L1Q96TA2 773 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 IFIH1Q9BYX4 1025 aaKnown RBP19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 ANO2Q9NQ90 1003 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 PKD2L1Q9P0L9 805 aa19.17■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 NLRC5Q86WI3 1866 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 MGAT3Q09327 533 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 HEATR3Q7Z4Q2 680 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 RPAINQ86UA6 219 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 MICU3Q86XE3 530 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 SEPT1Q8WYJ6 367 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 UBE2ZQ9H832 354 aaPredicted RBP19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 ERAP1Q9NZ08 941 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 PCDHA6Q9UN73 950 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 PCDHA8Q9Y5H6 950 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 NCOR1O75376 2440 aa19.16■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 SPDYE3A6NKU9 549 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 GHRP10912 638 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 PPFIA1Q13136 1202 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 GRIK4Q16099 956 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 MARCH8Q5T0T0 291 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 TAF2Q6P1X5 1199 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 SKAP1Q86WV1 359 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 MRPL38Q96DV4 380 aaKnown RBP19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 SAMD11Q96NU1 681 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 EHMT1Q9H9B1 1298 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 JADE2Q9NQC1 790 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 TUBE1Q9UJT0 475 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 CNTNAP5Q8WYK1 1306 aa19.15■□□□□ 0.66
VPS9D1-AS1-201ENST00000562298 RALGAPA2Q2PPJ7 1873 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 MBLAC1A4D2B0 266 aaPredicted RBP19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 H3BNC9 293 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 WWC2Q6AWC2 1192 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 GLG1Q92896 1179 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 KHSRPQ92945 711 aaKnown RBP eCLIP19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 ZBTB10Q96DT7 871 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 PCYT2Q99447 389 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 EPHX3Q9H6B9 360 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 C5orf42Q9H799 3197 aa19.14■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 LPIN1Q14693 890 aa19.13■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 APOA5Q6Q788 366 aa19.13■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 TMEM192Q8IY95 271 aa19.13■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 CYP2W1Q8TAV3 490 aa19.13■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 DNAJB3Q8WWF6 145 aa19.13■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 C1QTNF1Q9BXJ1 281 aa19.13■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 SMARCAD1Q9H4L7 1026 aa19.13■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 CD320Q9NPF0 282 aa19.13■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 KAT6AQ92794 2004 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 MAFGO15525 162 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 LINC00271P0C7V0 271 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 KCNA5P22460 613 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 FUT2Q10981 343 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 GPM6BQ13491 265 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 LEXMQ3ZCV2 418 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 PGBD1Q96JS3 809 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 TCEANC2Q96MN5 208 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 MXRA8Q9BRK3 442 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 RC3H2Q9HBD1 1191 aaKnown RBP19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 JPH1Q9HDC5 661 aaPredicted RBP19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 KCNH7Q9NS40 1196 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 ATG2AQ2TAZ0 1938 aa19.12■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 IGBP1P78318 339 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 EXOSC10Q01780 885 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms