RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 A0A1B0GTL3 188 aa8.78□□□□□ -1
SMG1-204ENST00000561940 TCRBV5S2A0A599 114 aa8.78□□□□□ -1
SMG1-204ENST00000561940 ARVCFO00192 962 aa8.78□□□□□ -1
SMG1-204ENST00000561940 SRGAP2CP0DJJ0 459 aa8.78□□□□□ -1
SMG1-204ENST00000561940 GNAT1P11488 350 aa8.78□□□□□ -1
SMG1-204ENST00000561940 CHRNA2Q15822 529 aa8.78□□□□□ -1
SMG1-204ENST00000561940 SPOCD1Q6ZMY3 1216 aa8.78□□□□□ -1
SMG1-204ENST00000561940 TMEM151BQ8IW70 566 aa8.78□□□□□ -1
SMG1-204ENST00000561940 AFAP1L2Q8N4X5 818 aa8.78□□□□□ -1
SMG1-204ENST00000561940 FNIP1Q8TF40 1166 aa8.78□□□□□ -1
SMG1-204ENST00000561940 CPA5Q8WXQ8 436 aa8.78□□□□□ -1
SMG1-204ENST00000561940 MYOTQ9UBF9 498 aa8.78□□□□□ -1
SMG1-204ENST00000561940 ATP8A1Q9Y2Q0 1164 aa8.78□□□□□ -1
SMG1-204ENST00000561940 KRIT1O00522 736 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 NKRFO15226 690 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMG1-204ENST00000561940 POU3F2P20265 443 aaPredicted RBP8.77□□□□□ -1.01
SMG1-204ENST00000561940 NFKB2Q00653 900 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 GRIN1Q05586 938 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 SMAD4Q13485 552 aaKnown RBP8.77□□□□□ -1.01
SMG1-204ENST00000561940 SKOR2Q2VWA4 1001 aaPredicted RBP8.77□□□□□ -1.01
SMG1-204ENST00000561940 PIK3R6Q5UE93 754 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 ZCCHC8Q6NZY4 707 aaKnown RBP8.77□□□□□ -1.01
SMG1-204ENST00000561940 OTOP3Q7RTS5 596 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 DDX42Q86XP3 938 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMG1-204ENST00000561940 PPM1KQ8N3J5 372 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 PRPF38AQ8NAV1 312 aaKnown RBP8.77□□□□□ -1.01
SMG1-204ENST00000561940 KRTAP4-7Q9BYR0 210 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 SLC6A20Q9NP91 592 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 ZNF652Q9Y2D9 606 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 COQ6Q9Y2Z9 468 aa8.77□□□□□ -1.01
SMG1-204ENST00000561940 FAM47E-STBD1D6RA91 191 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 GLRX3O76003 335 aaKnown RBP8.76□□□□□ -1.01
SMG1-204ENST00000561940 LTFP02788 710 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 CYP2C8P10632 490 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 CFAP100Q494V2 611 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 EMC4Q5J8M3 183 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 CDCA2Q69YH5 1023 aaPredicted RBP8.76□□□□□ -1.01
SMG1-204ENST00000561940 MIB1Q86YT6 1006 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 SIAH1Q8IUQ4 282 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 FAM126BQ8IXS8 530 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 ZNF526Q8TF50 670 aaPredicted RBP8.76□□□□□ -1.01
SMG1-204ENST00000561940 ZBTB8AQ96BR9 441 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 SMOC1Q9H4F8 434 aa8.76□□□□□ -1.01
SMG1-204ENST00000561940 FFAR3O14843 346 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 CKMP06732 381 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 SPIRE1Q08AE8 756 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 STRN3Q13033 797 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 PAK1Q13153 545 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 ZC3H7AQ8IWR0 971 aaKnown RBP8.75□□□□□ -1.01
SMG1-204ENST00000561940 PCDH19Q8TAB3 1148 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 CLEC4DQ8WXI8 215 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 GORASP1Q9BQQ3 440 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 DDX56Q9NY93 547 aaKnown RBP8.75□□□□□ -1.01
SMG1-204ENST00000561940 SAMD15Q9P1V8 674 aa8.75□□□□□ -1.01
SMG1-204ENST00000561940 CDK11BP21127 795 aaKnown RBP8.74□□□□□ -1.01
SMG1-204ENST00000561940 CR1LQ2VPA4 569 aa8.74□□□□□ -1.01
SMG1-204ENST00000561940 KRTAP19-4Q3LI73 84 aa8.74□□□□□ -1.01
SMG1-204ENST00000561940 LHFPL2Q6ZUX7 228 aa8.74□□□□□ -1.01
SMG1-204ENST00000561940 ZC3H18Q86VM9 953 aaKnown RBP8.74□□□□□ -1.01
SMG1-204ENST00000561940 AHI1Q8N157 1196 aa8.74□□□□□ -1.01
SMG1-204ENST00000561940 IGSF22Q8N9C0 903 aa8.74□□□□□ -1.01
SMG1-204ENST00000561940 TP53I13Q8NBR0 393 aaPredicted RBP8.74□□□□□ -1.01
SMG1-204ENST00000561940 CATSPERZQ9NTU4 200 aa8.74□□□□□ -1.01
SMG1-204ENST00000561940 ASH2LQ9UBL3 628 aa8.74□□□□□ -1.01
SMG1-204ENST00000561940 MAFKO60675 156 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 TRIM13O60858 407 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 EYA4O95677 639 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 PYGMP11217 842 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 HTRA3P83110 453 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 TUSC3Q13454 348 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 FAM50AQ14320 339 aaKnown RBP8.73□□□□□ -1.01
SMG1-204ENST00000561940 VWA3BQ502W6 1294 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 TOE1Q96GM8 510 aaKnown RBP8.73□□□□□ -1.01
SMG1-204ENST00000561940 CD244Q9BZW8 370 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 RBPJLQ9UBG7 517 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 DSEQ9UL01 958 aa8.73□□□□□ -1.01
SMG1-204ENST00000561940 ZNF891A8MT65 544 aaPredicted RBP8.72□□□□□ -1.01
SMG1-204ENST00000561940 M0R2C6 588 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 LRG1P02750 347 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 FLT3P36888 993 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 DNM2P50570 870 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 NKX3-2P78367 333 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 UBE2R2Q712K3 238 aaPredicted RBP8.72□□□□□ -1.01
SMG1-204ENST00000561940 DDX46Q7L014 1031 aaKnown RBP8.72□□□□□ -1.01
SMG1-204ENST00000561940 LINC01356Q8N9X3 169 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 SYT8Q8NBV8 401 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 WNK4Q96J92 1243 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 C11orf84Q9BUA3 381 aaPredicted RBP8.72□□□□□ -1.01
SMG1-204ENST00000561940 ZCCHC4Q9H5U6 513 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 SPATA6Q9NWH7 488 aaPredicted RBP8.72□□□□□ -1.01
SMG1-204ENST00000561940 DTLQ9NZJ0 730 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 KLHL42Q9P2K6 505 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 TELO2Q9Y4R8 837 aa8.72□□□□□ -1.01
SMG1-204ENST00000561940 TCRBV5S4A2TA0A5A2 114 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 B4E1Z4 1266 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 NAT1P18440 290 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 KRT15P19012 456 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 PLEKHG6Q3KR16 790 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 FBLN7Q53RD9 439 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 TEPPQ6URK8 271 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms