RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 SLC43A3Q8NBI5 491 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 GJA10Q969M2 543 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 IL17RAQ96F46 866 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 SCLYQ96I15 445 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 PHF20Q9BVI0 1012 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 AZI2Q9H6S1 392 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
HERC1-212ENST00000561348 TBX21Q9UL17 535 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 GSTTP1A0A1W2PQM5 241 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 C17orf102A2RUQ5 167 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 MEIS1O00470 390 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 CCNT1O60563 726 aaKnown RBP11.48□□□□□ -0.57
HERC1-212ENST00000561348 TDP2O95551 362 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 F2P00734 622 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 CYP3A4P08684 503 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 SMIM10L2AP0DMW4 78 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 SMIM10L2BP0DMW5 78 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 ACTR2P61160 394 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 ST3GAL1Q11201 340 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 NR5A1Q13285 461 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 ITGB3BPQ13352 177 aaPredicted RBP11.48□□□□□ -0.57
HERC1-212ENST00000561348 SAFBQ15424 915 aaKnown RBP eCLIP11.48□□□□□ -0.57
HERC1-212ENST00000561348 SHHQ15465 462 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 KRT40Q6A162 431 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 GALNT17Q6IS24 598 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 CKAP2LQ8IYA6 745 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 TDHQ8IZJ6 230 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 ATP6V0A1Q93050 837 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 C8orf76Q96K31 380 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 TBC1D32Q96NH3 1257 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 C16orf70Q9BSU1 422 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 NOC4LQ9BVI4 516 aaKnown RBP11.48□□□□□ -0.57
HERC1-212ENST00000561348 SEZ6LQ9BYH1 1024 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 BACH2Q9BYV9 841 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 FTOQ9C0B1 505 aaKnown RBP eCLIP11.48□□□□□ -0.57
HERC1-212ENST00000561348 SETD4Q9NVD3 440 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 TRPC6Q9Y210 931 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
HERC1-212ENST00000561348 FAM205CA6NFA0 338 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 RBAK-RBAKDNI3L0D1 243 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 USP11P51784 963 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 EPHB4P54760 987 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
HERC1-212ENST00000561348 PTPN11Q06124 597 aaPredicted RBP11.47□□□□□ -0.57
HERC1-212ENST00000561348 BFSP2Q13515 415 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 C9orf50Q5SZB4 431 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 MFSD5Q6N075 450 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 DIS3L2Q8IYB7 885 aaKnown RBP11.47□□□□□ -0.57
HERC1-212ENST00000561348 RNPC3Q96LT9 517 aaKnown RBP11.47□□□□□ -0.57
HERC1-212ENST00000561348 RNPEPQ9H4A4 650 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 SMARCAD1Q9H4L7 1026 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 DDX25Q9UHL0 483 aaKnown RBP11.47□□□□□ -0.57
HERC1-212ENST00000561348 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
HERC1-212ENST00000561348 IGLV3-22A0A075B6J6 115 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 ZBBXA8MT70 800 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 BTBD18B2RXH4 712 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 GAS7O60861 476 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
HERC1-212ENST00000561348 CTSHP09668 335 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 THPOP40225 353 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 STAT5BP51692 787 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 PPFIA1Q13136 1202 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 PPIGQ13427 754 aaKnown RBP eCLIP11.46□□□□□ -0.57
HERC1-212ENST00000561348 NPY5RQ15761 445 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 LRCH2Q5VUJ6 765 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 MCTP1Q6DN14 999 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 SWSAP1Q6NVH7 229 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 MIS18BP1Q6P0N0 1132 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 NIPA1Q7RTP0 329 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 NEK8Q86SG6 692 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 CCDC155Q8N6L0 562 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 DAGLBQ8NCG7 672 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 TMX3Q96JJ7 454 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 ERAP1Q9NZ08 941 aa11.46□□□□□ -0.57
HERC1-212ENST00000561348 SCN10AQ9Y5Y9 1956 aa11.46□□□□□ -0.58
HERC1-212ENST00000561348 KAT6AQ92794 2004 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 TRIP12Q14669 1992 aaPredicted RBP11.45□□□□□ -0.58
HERC1-212ENST00000561348 NFASCO94856 1347 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 HAS3O00219 553 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 MSH4O15457 936 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 TREHO43280 583 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 CCNE2O96020 404 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 MMP1P03956 469 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 GNAT1P11488 350 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 BMP8BP34820 402 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 HMGN5P82970 282 aaKnown RBP11.45□□□□□ -0.58
HERC1-212ENST00000561348 HIC1Q14526 733 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 EARS2Q5JPH6 523 aaKnown RBP11.45□□□□□ -0.58
HERC1-212ENST00000561348 FAM160B1Q5W0V3 765 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 PDXDC2PQ6P474 469 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 ZNF365Q70YC5 407 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 ZBTB10Q96DT7 871 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.45□□□□□ -0.582e-8■■■■■ 40.2
HERC1-212ENST00000561348 LLPHQ9BRT6 129 aaKnown RBP11.45□□□□□ -0.58
HERC1-212ENST00000561348 TEKT3Q9BXF9 490 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 FAM49AQ9H0Q0 323 aaPredicted RBP11.45□□□□□ -0.58
HERC1-212ENST00000561348 WNT8AQ9H1J5 351 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms