RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 CDC45O75419 566 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 POLR2MP0CAP2 368 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-223ENST00000561304 CPA1P15085 419 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 LIFRP42702 1097 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 EXOSC10Q01780 885 aaKnown RBP8.55□□□□□ -1.04
ZEB1-223ENST00000561304 HSDL1Q3SXM5 330 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 USP17L6PQ6QN14 398 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 TMTC3Q6ZXV5 915 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 OTOP2Q7RTS6 562 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 VSIG10LQ86VR7 867 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 MICU3Q86XE3 530 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 PPTC7Q8NI37 304 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 CTCFLQ8NI51 663 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-223ENST00000561304 HERVK_113Q902F9 699 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 DHX38Q92620 1227 aaKnown RBP8.55□□□□□ -1.04
ZEB1-223ENST00000561304 WNT8BQ93098 351 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 RRP36Q96EU6 259 aaKnown RBP8.55□□□□□ -1.04
ZEB1-223ENST00000561304 MTA3Q9BTC8 594 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 SEZ6LQ9BYH1 1024 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 PBX4Q9BYU1 374 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 MAP3K20Q9NYL2 800 aaKnown RBP8.55□□□□□ -1.04
ZEB1-223ENST00000561304 BRPF3Q9ULD4 1205 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 GTF3C3Q9Y5Q9 886 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 MYH9P35579 1960 aaKnown RBP8.55□□□□□ -1.04
ZEB1-223ENST00000561304 KIAA1671Q9BY89 1806 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-223ENST00000561304 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-223ENST00000561304 HAS3O00219 553 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 KPNA6O60684 536 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 GGPS1O95749 300 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 F2P00734 622 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 CCND2P30279 289 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 KIF5BP33176 963 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 GPNMBQ14956 572 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 GRIN2CQ14957 1233 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 UBE2SQ16763 222 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 TCTN1Q2MV58 587 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 BRDTQ58F21 947 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-223ENST00000561304 CELF3Q5SZQ8 465 aaKnown RBP8.54□□□□□ -1.04
ZEB1-223ENST00000561304 APOA5Q6Q788 366 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 DEFB128Q7Z7B8 93 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 SESTD1Q86VW0 696 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 SGMS1Q86VZ5 419 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 CCDC82Q8N4S0 544 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 SAMD3Q8N6K7 520 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 ALG1Q9BT22 464 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 HDAC6Q9UBN7 1215 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 YBX2Q9Y2T7 364 aaKnown RBP8.54□□□□□ -1.04
ZEB1-223ENST00000561304 EVPLQ92817 2033 aa8.54□□□□□ -1.04
ZEB1-223ENST00000561304 PIK3CDO00329 1044 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 TRIM66O15016 1216 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 FGBP02675 491 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 SUPT20HL2P0C7V6 817 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 MYOGP15173 224 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 CASTP20810 708 aaKnown RBP8.53□□□□□ -1.04
ZEB1-223ENST00000561304 SMARCA1P28370 1054 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 RABGGTBP53611 331 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 ZNF200P98182 395 aaPredicted RBP8.53□□□□□ -1.04
ZEB1-223ENST00000561304 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
ZEB1-223ENST00000561304 FUT2Q10981 343 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 LAMC2Q13753 1193 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 PTGISQ16647 500 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 DGKDQ16760 1214 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 KIAA0753Q2KHM9 967 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 DHX37Q8IY37 1157 aaKnown RBP8.53□□□□□ -1.04
ZEB1-223ENST00000561304 FANCBQ8NB91 859 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 SLC17A8Q8NDX2 589 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 TIFAQ96CG3 184 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 SPATA33Q96N06 139 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 INPP4AQ96PE3 977 aaPredicted RBP8.53□□□□□ -1.04
ZEB1-223ENST00000561304 NEK1Q96PY6 1258 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 C16orf70Q9BSU1 422 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 RTEL1Q9NZ71 1219 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 SEC63Q9UGP8 760 aaKnown RBP8.53□□□□□ -1.04
ZEB1-223ENST00000561304 GTF2IRD1Q9UHL9 959 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 SLC12A7Q9Y666 1083 aa8.53□□□□□ -1.04
ZEB1-223ENST00000561304 TMEM265A0A087WTH1 108 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 ARHGEF15O94989 841 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 IQCF3P0C7M6 154 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 CALM1P0DP23 149 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 CALM2P0DP24 149 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 CALM3P0DP25 149 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 CDC27P30260 824 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 ICAM3P32942 547 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 GNAQP50148 359 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 USP46P62068 366 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 TRAF1Q13077 416 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 TRIM71Q2Q1W2 868 aaKnown RBP8.52□□□□□ -1.05
ZEB1-223ENST00000561304 TSGA10IPQ3SY00 556 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 RNF20Q5VTR2 975 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 PCNX4Q63HM2 1172 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 WWC2Q6AWC2 1192 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 TRAF7Q6Q0C0 670 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 TRIM50Q86XT4 487 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 TMTC2Q8N394 836 aa8.52□□□□□ -1.05
ZEB1-223ENST00000561304 USP38Q8NB14 1042 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms