RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 HAS1Q92839 578 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 FERMT2Q96AC1 680 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 TOX2Q96NM4 488 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 MTMR9Q96QG7 549 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 KATNAL1Q9BW62 490 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 MROH7Q68CQ1 1323 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 H3BRB1 525 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 NEMFO60524 1076 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 CCNE2O96020 404 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 LGALS2P05162 132 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 MYL3P08590 195 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 TCF7P36402 384 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 ACTR2P61160 394 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 PPP2R5CQ13362 524 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 ITGA7Q13683 1181 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 GNL2Q13823 731 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 BECN1Q14457 450 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 LRRC26Q2I0M4 334 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 RILPL1Q5EBL4 403 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 LRCH2Q5VUJ6 765 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 PLPPR4Q7Z2D5 763 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 C4orf32Q8N8J7 132 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 AFAP1L1Q8TED9 768 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 TUT1Q9H6E5 874 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 NOL7Q9UMY1 257 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 MTMR6Q9Y217 621 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 TELO2Q9Y4R8 837 aa10.89□□□□□ -0.67
RABGGTA-221ENST00000561055 STX6O43752 255 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 GAS7O60861 476 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 BAG4O95429 457 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 CD4P01730 458 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 HSP90AA1P07900 732 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 HOXC8P31273 242 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 SFNP31947 248 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 PSEN2P49810 448 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 SLC26A2P50443 739 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 SPIRE1Q08AE8 756 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 NBPF20Q3BBV1 942 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 TTC38Q5R3I4 469 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 MCTP1Q6DN14 999 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 PCYT2Q99447 389 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 TEKT3Q9BXF9 490 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 TANC1Q9C0D5 1861 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 SMARCAD1Q9H4L7 1026 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 ZSCAN16Q9H4T2 348 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 PKD2L1Q9P0L9 805 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 PCDHA10Q9Y5I2 948 aa10.88□□□□□ -0.67
RABGGTA-221ENST00000561055 WDR64B1ANS9 1081 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 LAD1O00515 517 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 SORBS3O60504 671 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 SUPT20HL2P0C7V6 817 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 STAT5BP51692 787 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 JAK3P52333 1124 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 RTP1P59025 263 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 PSMC6P62333 389 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 RESTQ13127 1097 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 MFSD10Q14728 455 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 KIAA0753Q2KHM9 967 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 MIS18BP1Q6P0N0 1132 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 FAM126BQ8IXS8 530 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 TMEM60Q9H2L4 133 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 UNC45AQ9H3U1 944 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 FOXD4L1Q9NU39 408 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 ERAP1Q9NZ08 941 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 VAV3Q9UKW4 847 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 ZNF215Q9UL58 517 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 PCDHA12Q9UN75 941 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 PCDHB6Q9Y5E3 794 aa10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 MAFBQ9Y5Q3 323 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-221ENST00000561055 CEP290O15078 2479 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 SCN5AQ14524 2016 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 VPS37CA5D8V6 355 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 PSAPP07602 524 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 ZNF286BP0CG31 522 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 MCM7P33993 719 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 PRPHP41219 470 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 ATN1P54259 1190 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 ADAM17P78536 824 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 TLE2Q04725 743 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 CALCRLQ16602 461 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 TRIM60Q495X7 471 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 CCDC60Q8IWA6 550 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 TNPO1Q92973 898 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 GJA10Q969M2 543 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 VTI1AQ96AJ9 217 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 TTC12Q9H892 705 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 DISC1Q9NRI5 854 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 GTF2IRD1Q9UHL9 959 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 SIP14410 1827 aa10.86□□□□□ -0.67
RABGGTA-221ENST00000561055 IGSF9BQ9UPX0 1349 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 MYH11P35749 1972 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 EML1O00423 815 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 TLR3O15455 904 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 EVI5O60447 810 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 OR52Z1P0C646 297 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms