RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 SEC23AQ15436 765 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 IMMTQ16891 758 aaKnown RBP8.43□□□□□ -1.06
GABPB1-211ENST00000561010 TCTN1Q2MV58 587 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 ASPRV1Q53RT3 343 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 GPATCH4Q5T3I0 446 aaKnown RBP8.43□□□□□ -1.06
GABPB1-211ENST00000561010 GDF6Q6KF10 455 aaPredicted RBP8.43□□□□□ -1.06
GABPB1-211ENST00000561010 CCDC62Q6P9F0 684 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 LIAT1Q6ZQX7 453 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 IQCA1Q86XH1 822 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 FBXO11Q86XK2 927 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 DGKHQ86XP1 1220 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 ARMC2Q8NEN0 867 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 DNERQ8NFT8 737 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 EPS8L1Q8TE68 723 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 GPKOWQ92917 476 aaPredicted RBP eCLIP8.43□□□□□ -1.06
GABPB1-211ENST00000561010 CTAGE1Q96RT6 745 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 RMDN3Q96TC7 470 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 GAS2L1Q99501 681 aaPredicted RBP8.43□□□□□ -1.06
GABPB1-211ENST00000561010 DSCC1Q9BVC3 393 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 MSRAQ9UJ68 235 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 SLC4A7Q9Y6M7 1214 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 ABCB11O95342 1321 aa8.43□□□□□ -1.06
GABPB1-211ENST00000561010 A6NJR5 290 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 KLRF2D3W0D1 207 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 MYCLP12524 364 aaPredicted RBP8.42□□□□□ -1.06
GABPB1-211ENST00000561010 ATP2A2P16615 1042 aaKnown RBP8.42□□□□□ -1.06
GABPB1-211ENST00000561010 ZNF200P98182 395 aaPredicted RBP8.42□□□□□ -1.06
GABPB1-211ENST00000561010 COL9A3Q14050 684 aaPredicted RBP8.42□□□□□ -1.06
GABPB1-211ENST00000561010 RAB30Q15771 203 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 IFIT1BQ5T764 474 aaKnown RBP8.42□□□□□ -1.06
GABPB1-211ENST00000561010 TTC22Q5TAA0 569 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 ARHGEF16Q5VV41 709 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 STOX1Q6ZVD7 989 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 HOMER1Q86YM7 354 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 DHX38Q92620 1227 aaKnown RBP8.42□□□□□ -1.06
GABPB1-211ENST00000561010 ANKS1AQ92625 1134 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 KAT2BQ92831 832 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 WNT8BQ93098 351 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 UBAC1Q9BSL1 405 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 ALG1Q9BT22 464 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 FTOQ9C0B1 505 aaKnown RBP eCLIP8.42□□□□□ -1.06
GABPB1-211ENST00000561010 BCAS3Q9H6U6 928 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 SLC28A3Q9HAS3 691 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 PXMP2Q9NR77 195 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 MAD2L2Q9UI95 211 aa8.42□□□□□ -1.06
GABPB1-211ENST00000561010 RAD50Q92878 1312 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 LOC102724159A0A0B4J2E5 919 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.06
GABPB1-211ENST00000561010 GH1P01241 217 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 CA3P07451 260 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 NR3C2P08235 984 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 IQCF3P0C7M6 154 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 GPNMBQ14956 572 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 PWP2Q15269 919 aaKnown RBP8.41□□□□□ -1.06
GABPB1-211ENST00000561010 PTGISQ16647 500 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 PLA2G2CQ5R387 149 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 NFRKBQ6P4R8 1299 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 SKAP1Q86WV1 359 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 RPUSD2Q8IZ73 545 aaKnown RBP8.41□□□□□ -1.06
GABPB1-211ENST00000561010 NSUN6Q8TEA1 469 aaKnown RBP8.41□□□□□ -1.06
GABPB1-211ENST00000561010 NECAB3Q96P71 396 aaPredicted RBP8.41□□□□□ -1.06
GABPB1-211ENST00000561010 PIGSQ96S52 555 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 KRT23Q9C075 422 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 MTIF3Q9H2K0 278 aaKnown RBP8.41□□□□□ -1.06
GABPB1-211ENST00000561010 GDPD2Q9HCC8 539 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 HDAC6Q9UBN7 1215 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 NOD1Q9Y239 953 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 MRPL11Q9Y3B7 192 aaKnown RBP8.41□□□□□ -1.06
GABPB1-211ENST00000561010 TELO2Q9Y4R8 837 aa8.41□□□□□ -1.06
GABPB1-211ENST00000561010 LCHNA4D1U4 455 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 HIP1O00291 1037 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 CYTH3O43739 400 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 GDF9O60383 454 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 CYP21A2P08686 494 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 SUPT20HL2P0C7V6 817 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 CHMLP26374 656 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 SLC19A1P41440 591 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 ABL2P42684 1182 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 HSD17B4P51659 736 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 ANTXR2P58335 489 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 DEFB103AP81534 67 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 SP2Q02086 613 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 TFF2Q03403 129 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 AAMPQ13685 434 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 STXBP2Q15833 593 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 BRDTQ58F21 947 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-211ENST00000561010 PTCRAQ6ISU1 281 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-211ENST00000561010 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 TICAM2Q86XR7 235 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 RETREG2Q8NC44 543 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 POM121Q96HA1 1249 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 MPHOSPH6Q99547 160 aaKnown RBP8.4□□□□□ -1.06
GABPB1-211ENST00000561010 MYL10Q9BUA6 226 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 OSBPL7Q9BZF2 842 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 CNNM2Q9H8M5 875 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 FKBPLQ9UIM3 349 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 DDX41Q9UJV9 622 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms