RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CLIC4Q9Y696 253 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 MRVI1Q9Y6F6 885 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 TBX3O15119 743 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 DHX15O43143 795 aaKnown RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 MAP3K7O43318 606 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 ATP9AO75110 1047 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 OR52Z1P0C646 297 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 AKR1A1P14550 325 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 SMPD1P17405 629 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 ZNF76P36508 570 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 NASPP49321 788 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 SP2Q02086 613 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 ARHGAP1Q07960 439 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 SPIRE1Q08AE8 756 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 SF3A1Q15459 793 aaKnown RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 ZNF174Q15697 407 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 PKN2Q16513 984 aaKnown RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 LY6KQ17RY6 165 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 FOXD4L6Q3SYB3 417 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 SLC9C1Q4G0N8 1177 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 ANO1Q5XXA6 986 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 B3GNT9Q6UX72 402 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 FOXD4L3Q6VB84 417 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 NLRX1Q86UT6 975 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 COPS5Q92905 334 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 SLC5A5Q92911 643 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 GJA10Q969M2 543 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 ARMC5Q96C12 935 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 ZNF333Q96JL9 665 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 CDHR1Q96JP9 859 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 MTMR9Q96QG7 549 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 UIMC1Q96RL1 719 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 BCAS3Q9H6U6 928 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 POLR3EQ9NVU0 708 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 PKD2L1Q9P0L9 805 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 DDX41Q9UJV9 622 aaKnown RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 VAV3Q9UKW4 847 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 GNEQ9Y223 722 aaKnown RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 TELO2Q9Y4R8 837 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 PCDHGA4Q9Y5G9 962 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 PCDHGA10Q9Y5H3 936 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 MORC2Q9Y6X9 1032 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 NFASCO94856 1347 aa7.96□□□□□ -1.14
CTDSPL2-210ENST00000560834 IPO5O00410 1097 aaKnown RBP7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 MAFGO15525 162 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 SEPT4O43236 478 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 PSMD10O75832 226 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 FARP2O94887 1054 aaPredicted RBP7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 YEATS4O95619 227 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 GGPS1O95749 300 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 TXNP10599 105 aaKnown RBP7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 TGFB3P10600 412 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 MTFR1Q15390 333 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 CALCRLQ16602 461 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 DUSP28Q4G0W2 176 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 GPR153Q6NV75 609 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 KCNV1Q6PIU1 500 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 TLK2Q86UE8 772 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 LINC00301Q8NCQ3 95 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 TNPO1Q92973 898 aaKnown RBP7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 EMID1Q96A84 441 aaPredicted RBP7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 SENP7Q9BQF6 1050 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 ZNF577Q9BSK1 485 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 MCOLN1Q9GZU1 580 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 UNC93B1Q9H1C4 597 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 PAK6Q9NQU5 681 aaPredicted RBP7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 SYNRGQ9UMZ2 1314 aa7.95□□□□□ -1.14
CTDSPL2-210ENST00000560834 LOXHD1Q8IVV2 1947 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 MYADML2A6NDP7 307 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 LAD1O00515 517 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 NKRFO15226 690 aaKnown RBP eCLIP7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 CTAGE5O15320 804 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 SORBS3O60504 671 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 ADAMTS4O75173 837 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 BMP15O95972 392 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 CCNE2O96020 404 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 CCL5P13501 91 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 PRPHP41219 470 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 NKX3-2P78367 333 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 KRT85P78386 507 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 TNFAIP2Q03169 654 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 CEBPZQ03701 1054 aaKnown RBP7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 GRIN1Q05586 938 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 PPP2R5CQ13362 524 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 IL17AQ16552 155 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 CELF3Q5SZQ8 465 aaKnown RBP7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 LRCH2Q5VUJ6 765 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 ATL3Q6DD88 541 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 IQSEC1Q6DN90 963 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 METTL7BQ6UX53 244 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 OR6J1Q8NGC5 347 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 FAM20AQ96MK3 541 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 ZNF396Q96N95 335 aaPredicted RBP7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 RIT2Q99578 217 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 TMUB1Q9BVT8 246 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 TEKT3Q9BXF9 490 aa7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 UPF3AQ9H1J1 476 aaKnown RBP7.94□□□□□ -1.14
CTDSPL2-210ENST00000560834 UNC45AQ9H3U1 944 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms