RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 BRF1Q92994 677 aa12.84□□□□□ -0.35
GABPB1-210ENST00000560825 PHKBQ93100 1093 aa12.84□□□□□ -0.35
GABPB1-210ENST00000560825 NCOA5Q9HCD5 579 aaKnown RBP12.84□□□□□ -0.35
GABPB1-210ENST00000560825 SSUH2Q9Y2M2 353 aa12.84□□□□□ -0.35
GABPB1-210ENST00000560825 TCF20Q9UGU0 1960 aaKnown RBP12.83□□□□□ -0.35
GABPB1-210ENST00000560825 EDIL3O43854 480 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 CTSHP09668 335 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 RFC2P35250 354 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 TCF7P36402 384 aaPredicted RBP12.83□□□□□ -0.36
GABPB1-210ENST00000560825 THPOP40225 353 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 TAP1Q03518 808 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 ITGB3BPQ13352 177 aaPredicted RBP12.83□□□□□ -0.36
GABPB1-210ENST00000560825 PPP2R2DQ66LE6 453 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 HERC6Q8IVU3 1022 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 CAGE1Q8TC20 777 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 LMBR1Q8WVP7 490 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 CUL5Q93034 780 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 ATP6V0A1Q93050 837 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 MSRAQ9UJ68 235 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 NAP1L2Q9ULW6 460 aaPredicted RBP12.83□□□□□ -0.36
GABPB1-210ENST00000560825 PCDHA11Q9Y5I1 949 aa12.83□□□□□ -0.36
GABPB1-210ENST00000560825 PRRC2BQ5JSZ5 2229 aaKnown RBP12.82□□□□□ -0.36
GABPB1-210ENST00000560825 EVPLQ92817 2033 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 C17orf102A2RUQ5 167 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 NOP56O00567 594 aaKnown RBP12.82□□□□□ -0.36
GABPB1-210ENST00000560825 PFKMP08237 780 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 MARK3P27448 753 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 NAPAP54920 295 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 TRAF1Q13077 416 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
GABPB1-210ENST00000560825 RAB30Q15771 203 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 NTRK3Q16288 839 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 MARCH8Q5T0T0 291 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 FAM117BQ6P1L5 589 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 RIC8AQ9NPQ8 531 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 NID2Q14112 1375 aa12.82□□□□□ -0.36
GABPB1-210ENST00000560825 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 STAM2O75886 525 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 IGFBP4P22692 258 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 MTMR1Q13613 665 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 NEDD9Q14511 834 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 DBF4BQ8NFT6 615 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 RASGRP4Q8TDF6 673 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 TRAPPC12Q8WVT3 735 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 CRYGNQ8WXF5 182 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 GPRASP2Q96D09 838 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 SENP7Q9BQF6 1050 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 ANO3Q9BYT9 981 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 AGXT2Q9BYV1 514 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 JADE2Q9NQC1 790 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 KCNH7Q9NS40 1196 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
GABPB1-210ENST00000560825 SPDYE3A6NKU9 549 aa12.8□□□□□ -0.36
GABPB1-210ENST00000560825 LPXNO60711 386 aa12.8□□□□□ -0.36
GABPB1-210ENST00000560825 LGR5O75473 907 aa12.8□□□□□ -0.36
GABPB1-210ENST00000560825 CCNE2O96020 404 aa12.8□□□□□ -0.36
GABPB1-210ENST00000560825 METAP2P50579 478 aaKnown RBP eCLIP12.8□□□□□ -0.36
GABPB1-210ENST00000560825 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
GABPB1-210ENST00000560825 ARHGAP4P98171 946 aa12.8□□□□□ -0.36
GABPB1-210ENST00000560825 PFKFB3Q16875 520 aaPredicted RBP12.8□□□□□ -0.36
GABPB1-210ENST00000560825 CNKSR3Q6P9H4 555 aa12.8□□□□□ -0.36
GABPB1-210ENST00000560825 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
GABPB1-210ENST00000560825 USP26Q9BXU7 913 aa12.8□□□□□ -0.36
GABPB1-210ENST00000560825 MTIF3Q9H2K0 278 aaKnown RBP12.8□□□□□ -0.36
GABPB1-210ENST00000560825 RBM28Q9NW13 759 aaKnown RBP12.8□□□□□ -0.36
GABPB1-210ENST00000560825 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
GABPB1-210ENST00000560825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.79□□□□□ -0.36
GABPB1-210ENST00000560825 RSPH10B2B2RC85 870 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 DDX39AO00148 427 aaKnown RBP12.79□□□□□ -0.36
GABPB1-210ENST00000560825 CHRNA1P02708 482 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 RSPH10BP0C881 870 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 ACTN1P12814 892 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 ADCY7P51828 1080 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 KRT32Q14532 448 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 XRRA1Q6P2D8 792 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 BLOC1S2Q6QNY1 142 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 NLRX1Q86UT6 975 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 CCDC155Q8N6L0 562 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 ARNTL2Q8WYA1 636 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 SLC9A7Q96T83 725 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
GABPB1-210ENST00000560825 AGO4Q9HCK5 861 aaKnown RBP12.79□□□□□ -0.36
GABPB1-210ENST00000560825 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 BDP1A6H8Y1 2624 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 IGLV3-22A0A075B6J6 115 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 DHX15O43143 795 aaKnown RBP12.79□□□□□ -0.36
GABPB1-210ENST00000560825 BAIAP3O94812 1187 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 SCG2P13521 617 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 PDIA3P30101 505 aaKnown RBP12.79□□□□□ -0.36
GABPB1-210ENST00000560825 PLEKHG4Q58EX7 1191 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 GJA10Q969M2 543 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms