RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 A0A087X0B3 334 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 FAM237AA0A1B0GTK4 181 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 RBM47A0AV96 593 aaKnown RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 WDR64B1ANS9 1081 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 KINO60870 393 aaKnown RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 MED24O75448 989 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 FARP2O94887 1054 aaPredicted RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 ZNF202O95125 648 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 ZNF865P0CJ78 1059 aaPredicted RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 PTGS1P23219 599 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 STAT6P42226 847 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 JAK3P52333 1124 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 TRIM32Q13049 653 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 IRF5Q13568 498 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 EPHA7Q15375 998 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 KLHL40Q2TBA0 621 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 CCDC144BQ3MJ40 725 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 CELF3Q5SZQ8 465 aaKnown RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 GJC2Q5T442 439 aaPredicted RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 RRAGBQ5VZM2 374 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 HAUS3Q68CZ6 603 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 ZNF746Q6NUN9 644 aaPredicted RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 CCDC62Q6P9F0 684 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 METTL7BQ6UX53 244 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 DHX37Q8IY37 1157 aaKnown RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 FMR1NBQ8N0W7 255 aaPredicted RBP11.71□□□□□ -0.53
TPM1-221ENST00000559831 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 DYDC2Q96IM9 177 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 DISC1Q9NRI5 854 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 SERTAD1Q9UHV2 236 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 TELO2Q9Y4R8 837 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
TPM1-221ENST00000559831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
TPM1-221ENST00000559831 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
TPM1-221ENST00000559831 GH1P01241 217 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 SMPD1P17405 629 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 PLCG1P19174 1290 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 CNGA1P29973 690 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 SFNP31947 248 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 PRMT2P55345 433 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 ACTR2P61160 394 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 TNFAIP2Q03169 654 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 GRB10Q13322 594 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 SNW1Q13573 536 aaKnown RBP11.7□□□□□ -0.54
TPM1-221ENST00000559831 CTTNQ14247 550 aaKnown RBP11.7□□□□□ -0.54
TPM1-221ENST00000559831 ECM1Q16610 540 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 IQSEC1Q6DN90 963 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 CAVIN1Q6NZI2 390 aaKnown RBP11.7□□□□□ -0.54
TPM1-221ENST00000559831 MIS18BP1Q6P0N0 1132 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 POTEGQ6S5H5 508 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 B3GNT9Q6UX72 402 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 TPH2Q8IWU9 490 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 ENGASEQ8NFI3 743 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 OR6J1Q8NGC5 347 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 SPATA33Q96N06 139 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 PYM1Q9BRP8 204 aaKnown RBP11.7□□□□□ -0.54
TPM1-221ENST00000559831 DDX19AQ9NUU7 478 aaKnown RBP11.7□□□□□ -0.54
TPM1-221ENST00000559831 RGL1Q9NZL6 768 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 PTCH2Q9Y6C5 1203 aa11.7□□□□□ -0.54
TPM1-221ENST00000559831 BACH1O14867 736 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 NKRFO15226 690 aaKnown RBP eCLIP11.69□□□□□ -0.54
TPM1-221ENST00000559831 FOXN1O15353 648 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 SLC26A4O43511 780 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 IGHA2P01877 340 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 HMGCRP04035 888 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 PSAPP07602 524 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 SUPT20HL2P0C7V6 817 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 HSPA8P11142 646 aaKnown RBP11.69□□□□□ -0.54
TPM1-221ENST00000559831 CYBAP13498 195 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
TPM1-221ENST00000559831 RPA1P27694 616 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 ARHGAP1Q07960 439 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 CACNB2Q08289 660 aaPredicted RBP11.69□□□□□ -0.54
TPM1-221ENST00000559831 CAMK4Q16566 473 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 LONRF3Q496Y0 759 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 DUSP28Q4G0W2 176 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 TMEM119Q4V9L6 283 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 CATSPER3Q86XQ3 398 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 SMAP1Q8IYB5 467 aaPredicted RBP11.69□□□□□ -0.54
TPM1-221ENST00000559831 CEP57L1Q8IYX8 460 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 IQUBQ8NA54 791 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 TRPV1Q8NER1 839 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 RDM1Q8NG50 284 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 NEK9Q8TD19 979 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
TPM1-221ENST00000559831 LENG1Q96BZ8 264 aaPredicted RBP11.69□□□□□ -0.54
TPM1-221ENST00000559831 LXNQ9BS40 222 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 POLR3CQ9BUI4 534 aaPredicted RBP11.69□□□□□ -0.54
TPM1-221ENST00000559831 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 TUFT1Q9NNX1 390 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 GABBR1Q9UBS5 961 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 NRBP1Q9UHY1 535 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 FAM184BQ9ULE4 1060 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 KIAA1024Q9UPX6 916 aa11.69□□□□□ -0.54
TPM1-221ENST00000559831 PCDHA10Q9Y5I2 948 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms