RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 P2RX5Q93086 422 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 HPS3Q969F9 1004 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 DUSP9Q99956 384 aaKnown RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 ASCC2Q9H1I8 757 aaPredicted RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 THAP9Q9H5L6 903 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 PANK4Q9NVE7 773 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 ADD3Q9UEY8 706 aaKnown RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 FBXO40Q9UH90 709 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 CHMP2AO43633 222 aa14.13□□□□□ -0.15
USP3-213ENST00000559711 MYCLP12524 364 aaPredicted RBP14.13□□□□□ -0.15
USP3-213ENST00000559711 IRX3P78415 501 aaPredicted RBP14.13□□□□□ -0.15
USP3-213ENST00000559711 PABPC4Q13310 644 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP3-213ENST00000559711 GIT2Q14161 759 aa14.13□□□□□ -0.15
USP3-213ENST00000559711 CTTNQ14247 550 aaKnown RBP14.13□□□□□ -0.15
USP3-213ENST00000559711 LRRC8AQ8IWT6 810 aa14.13□□□□□ -0.15
USP3-213ENST00000559711 GPRASP2Q96D09 838 aa14.13□□□□□ -0.15
USP3-213ENST00000559711 INPP4AQ96PE3 977 aaPredicted RBP14.13□□□□□ -0.15
USP3-213ENST00000559711 SPATC1LQ9H0A9 340 aa14.13□□□□□ -0.15
USP3-213ENST00000559711 PCDHA2Q9Y5H9 948 aa14.13□□□□□ -0.15
USP3-213ENST00000559711 OTOFQ9HC10 1997 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 TRIM49BA6NDI0 452 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 STAM2O75886 525 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 GJA5P36382 358 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 HERVK_113P62684 666 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 TCP11X2Q5H9J9 407 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 FAM26FQ5R3K3 315 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 MAP1SQ66K74 1059 aaPredicted RBP14.12□□□□□ -0.15
USP3-213ENST00000559711 ANKRD40Q6AI12 368 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 GPAT2Q6NUI2 795 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 TPH2Q8IWU9 490 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 DNERQ8NFT8 737 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 SLC10A4Q96EP9 437 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 NACC1Q96RE7 527 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 BHMT2Q9H2M3 363 aa14.12□□□□□ -0.15
USP3-213ENST00000559711 NPHP3-ACAD11A0A0J9YXS1 232 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 CNMDO75829 334 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 P4HBP07237 508 aaKnown RBP14.11□□□□□ -0.15
USP3-213ENST00000559711 LRMPQ12912 555 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 KRT31Q15323 416 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP3-213ENST00000559711 MIER3Q7Z3K6 550 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 NLRX1Q86UT6 975 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 KIAA1524Q8TCG1 905 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 TRIM47Q96LD4 638 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 IWS1Q96ST2 819 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 SRRTQ9BXP5 876 aaKnown RBP14.11□□□□□ -0.15
USP3-213ENST00000559711 SEMA6BQ9H3T3 888 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
USP3-213ENST00000559711 PFASO15067 1338 aa14.11□□□□□ -0.15
USP3-213ENST00000559711 KCNJ18B7U540 433 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 TRAF5O00463 557 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 ATP9AO75110 1047 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 KRT18P05783 430 aaKnown RBP14.1□□□□□ -0.15
USP3-213ENST00000559711 OSBPP22059 807 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 EEF1GP26641 437 aaKnown RBP14.1□□□□□ -0.15
USP3-213ENST00000559711 FKBP1BP68106 108 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 TBX2Q13207 712 aaPredicted RBP14.1□□□□□ -0.15
USP3-213ENST00000559711 SNAPC2Q13487 334 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 KCNJ12Q14500 433 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 ARID5BQ14865 1188 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 FILIP1LQ4L180 1135 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 HERC4Q5GLZ8 1057 aaPredicted RBP14.1□□□□□ -0.15
USP3-213ENST00000559711 RINT1Q6NUQ1 792 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 CCDC150Q8NCX0 1101 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 ANKRD20A12PQ8NF67 263 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 PIGOQ8TEQ8 1089 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 WRAP73Q9P2S5 460 aaPredicted RBP14.1□□□□□ -0.15
USP3-213ENST00000559711 LOC285556D6RIA3 1793 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 TESPA1A2RU30 521 aaPredicted RBP14.1□□□□□ -0.15
USP3-213ENST00000559711 DDX39AO00148 427 aaKnown RBP14.1□□□□□ -0.15
USP3-213ENST00000559711 RGS20O76081 388 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 LYPLA2O95372 231 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 SLC25A27O95847 323 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 PBX1P40424 430 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 LRRC63Q05C16 580 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 SPECC1LQ69YQ0 1117 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 ARMCX5Q6P1M9 558 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 C1orf186Q6ZWK4 172 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 MYOCDQ8IZQ8 938 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 ANKRD35Q8N283 1001 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 CSGALNACT2Q8N6G5 542 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 CDHR1Q96JP9 859 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 SENP7Q9BQF6 1050 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 REEP2Q9BRK0 252 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 LXNQ9BS40 222 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 RUSC1Q9BVN2 902 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 MOV10L1Q9BXT6 1211 aaKnown RBP14.1□□□□□ -0.15
USP3-213ENST00000559711 ZSWIM4Q9H7M6 989 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 KCND2Q9NZV8 630 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 PKD2L1Q9P0L9 805 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 RBPJLQ9UBG7 517 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 PYCARDQ9ULZ3 195 aa14.1□□□□□ -0.15
USP3-213ENST00000559711 PTPRFP10586 1907 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 ZBTB39O15060 712 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 TEX33O43247 280 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 PEX10O60683 326 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 SFNP31947 248 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 COPB2P35606 906 aa14.09□□□□□ -0.15
USP3-213ENST00000559711 JAK3P52333 1124 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms