RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 NT5DC1Q5TFE4 455 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 ARMCX2Q7L311 632 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 NPLOC4Q8TAT6 608 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 PYM1Q9BRP8 204 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 ARHGAP39Q9C0H5 1083 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 ZFYVE28Q9HCC9 887 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 MYMKA6NI61 221 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 GTPBP6O43824 516 aaPredicted RBP19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 MAPK4P31152 587 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 STX1AQ16623 288 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 KANK3Q6NY19 840 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 MIER3Q7Z3K6 550 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 SMARCE1Q969G3 411 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 PDGFCQ9NRA1 345 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 STK17AQ9UEE5 414 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 STAM2O75886 525 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 GNPTABQ3T906 1256 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 TPH2Q8IWU9 490 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 SMYD4Q8IYR2 804 aaPredicted RBP19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 ABRAQ8N0Z2 381 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 ERMNQ8TAM6 284 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 MORC4Q8TE76 937 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 LXNQ9BS40 222 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 POLR3CQ9BUI4 534 aaPredicted RBP19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 GRPEL1Q9HAV7 217 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 TBC1D22BQ9NU19 505 aa19.4■□□□□ 0.7
CHRNA3-206ENST00000559658 CA12O43570 354 aa19.39■□□□□ 0.7
CHRNA3-206ENST00000559658 STRNO43815 780 aa19.39■□□□□ 0.7
CHRNA3-206ENST00000559658 KLRC4O43908 158 aa19.39■□□□□ 0.7
CHRNA3-206ENST00000559658 ICAM3P32942 547 aa19.39■□□□□ 0.7
CHRNA3-206ENST00000559658 LY6KQ17RY6 165 aa19.39■□□□□ 0.7
CHRNA3-206ENST00000559658 PIGOQ8TEQ8 1089 aa19.39■□□□□ 0.7
CHRNA3-206ENST00000559658 TRIM9Q9C026 710 aa19.39■□□□□ 0.7
CHRNA3-206ENST00000559658 SAMM50Q9Y512 469 aa19.39■□□□□ 0.7
CHRNA3-206ENST00000559658 CEP350Q5VT06 3117 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 TMEM150BA6NC51 233 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 SSBP05455 408 aaKnown RBP eCLIP19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 NLRP12P59046 1061 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 MORC3Q14149 939 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 EPHA7Q15375 998 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 MORN1Q5T089 497 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 CYFIP1Q7L576 1253 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 MAML3Q96JK9 1138 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 NT5C3AQ9H0P0 336 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 CUEDC2Q9H467 287 aa19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 JPH1Q9HDC5 661 aaPredicted RBP19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 HOOK1Q9UJC3 728 aaKnown RBP19.39■□□□□ 0.69
CHRNA3-206ENST00000559658 PLA2G4BP0C869 781 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 VEGFBP49765 207 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 DYMQ7RTS9 669 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 DPP9Q86TI2 863 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 LUZP1Q86V48 1076 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 COPS5Q92905 334 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 HPS3Q969F9 1004 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 CBX8Q9HC52 389 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 FLRT1Q9NZU1 646 aa19.38■□□□□ 0.69
CHRNA3-206ENST00000559658 TBC1D8O95759 1140 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 RPN1P04843 607 aaKnown RBP19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 SLC12A3P55017 1021 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 RAD51AP2Q09MP3 1159 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 GJC2Q5T442 439 aaPredicted RBP19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 SV2BQ7L1I2 683 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 TRMT1LQ7Z2T5 733 aaKnown RBP19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 SH2D3AQ9BRG2 576 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 KATNBL1Q9H079 304 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 NFASCO94856 1347 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 THSD7BQ9C0I4 1608 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 SLC15A5A6NIM6 579 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 MAFGO15525 162 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 SNAI1O95863 264 aaPredicted RBP19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 KRT76Q01546 638 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 CCL14Q16627 93 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 CDHR1Q96JP9 859 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 BHMT2Q9H2M3 363 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 MAGEF1Q9HAY2 307 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 POLD4Q9HCU8 107 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 TUFT1Q9NNX1 390 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 ANO10Q9NW15 660 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 SLC9A2Q9UBY0 812 aa19.37■□□□□ 0.69
CHRNA3-206ENST00000559658 WDR64B1ANS9 1081 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 FARP2O94887 1054 aaPredicted RBP19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 CD44P16070 742 aaKnown RBP19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 ACTR2P61160 394 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 ASIC1P78348 528 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 KMT5BQ4FZB7 885 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 ARSHQ5FYA8 562 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 C7orf25Q9BPX7 421 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 RUSC1Q9BVN2 902 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 GDAQ9Y2T3 454 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 ARID2Q68CP9 1835 aa19.36■□□□□ 0.69
CHRNA3-206ENST00000559658 ASB14A6NK59 587 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 SMC2O95347 1197 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 GGPS1O95749 300 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 CYP11B2P19099 503 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 ZNF165P49910 485 aa19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 ZNF746Q6NUN9 644 aaPredicted RBP19.35■□□□□ 0.69
CHRNA3-206ENST00000559658 GPBP1Q86WP2 473 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms