RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 AK2P54819 239 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 ZNF200P98182 395 aaPredicted RBP12.49□□□□□ -0.41
SPG11-216ENST00000559347 SCRN1Q12765 414 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 PTK7Q13308 1070 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 TRIM71Q2Q1W2 868 aaKnown RBP12.49□□□□□ -0.41
SPG11-216ENST00000559347 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
SPG11-216ENST00000559347 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 MCTP2Q6DN12 878 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 NIPA1Q7RTP0 329 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 TRIM22Q8IYM9 498 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 RASGRP4Q8TDF6 673 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 WNT8BQ93098 351 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 JPH1Q9HDC5 661 aaPredicted RBP12.49□□□□□ -0.41
SPG11-216ENST00000559347 SH3GLB2Q9NR46 395 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 MTMR10Q9NXD2 777 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 CXXC1Q9P0U4 656 aaPredicted RBP12.49□□□□□ -0.41
SPG11-216ENST00000559347 COL4A4P53420 1690 aaPredicted RBP12.48□□□□□ -0.41
SPG11-216ENST00000559347 STK36Q9NRP7 1315 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 C17orf102A2RUQ5 167 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 MEIS1O00470 390 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 DEXIO95424 95 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 CYP3A4P08684 503 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 ARP10275 920 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 CKBP12277 381 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 SELPP16109 830 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 DNAJB2P25686 324 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
SPG11-216ENST00000559347 ITGB3BPQ13352 177 aaPredicted RBP12.48□□□□□ -0.41
SPG11-216ENST00000559347 LRRC8DQ7L1W4 858 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 OTOP2Q7RTS6 562 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 DEFB128Q7Z7B8 93 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 SERINC5Q86VE9 423 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
SPG11-216ENST00000559347 RETREG2Q8NC44 543 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 BICD2Q8TD16 824 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 AIFM3Q96NN9 605 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
SPG11-216ENST00000559347 AGO4Q9HCK5 861 aaKnown RBP12.48□□□□□ -0.41
SPG11-216ENST00000559347 SLC9A2Q9UBY0 812 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 TPCN1Q9ULQ1 816 aa12.48□□□□□ -0.41
SPG11-216ENST00000559347 TMEM265A0A087WTH1 108 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.47□□□□□ -0.41
SPG11-216ENST00000559347 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.47□□□□□ -0.41
SPG11-216ENST00000559347 PFKFB2O60825 505 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 SETQ01105 290 aaPredicted RBP12.47□□□□□ -0.41
SPG11-216ENST00000559347 ANKRD1Q15327 319 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 C8orf34Q49A92 452 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 CPLX2Q6PUV4 134 aaKnown RBP12.47□□□□□ -0.41
SPG11-216ENST00000559347 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 LMBR1Q8WVP7 490 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 SEPT1Q8WYJ6 367 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 ATP6V0A1Q93050 837 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 GUCD1Q96NT3 240 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 SDF4Q9BRK5 362 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
SPG11-216ENST00000559347 RNPEPQ9H4A4 650 aa12.47□□□□□ -0.41
SPG11-216ENST00000559347 GRXCR1A8MXD5 290 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 TREHO43280 583 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 LGR5O75473 907 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 CDKL5O76039 1030 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 PARNO95453 639 aaKnown RBP12.46□□□□□ -0.41
SPG11-216ENST00000559347 LARGE1O95461 756 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 MARK3P27448 753 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 ZNF76P36508 570 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 ACTR2P61160 394 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 ADAM17P78536 824 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
SPG11-216ENST00000559347 GPNMBQ14956 572 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 NPY5RQ15761 445 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 ZNF618Q5T7W0 954 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 PLA2G4DQ86XP0 818 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 FAM177A1Q8N128 213 aaPredicted RBP12.46□□□□□ -0.41
SPG11-216ENST00000559347 DAGLBQ8NCG7 672 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 FAM161BQ96MY7 647 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 PCYT2Q99447 389 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 PBX4Q9BYU1 374 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 SLKQ9H2G2 1235 aaPredicted RBP12.46□□□□□ -0.41
SPG11-216ENST00000559347 SETD4Q9NVD3 440 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 ERAP1Q9NZ08 941 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.41
SPG11-216ENST00000559347 NRCAMQ92823 1304 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 ZBBXA8MT70 800 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 M0R2N6 131 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 NBNO60934 754 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 CXCL10P02778 98 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 ACTN1P12814 892 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 CIITAP33076 1130 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 PBX2P40425 430 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 NLRP5P59047 1200 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 MBTPS1Q14703 1052 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 ME3Q16798 604 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 GLG1Q92896 1179 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 GTF3C6Q969F1 213 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 LENG9Q96B70 501 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 TIFAQ96CG3 184 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 SMARCAD1Q9H4L7 1026 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 SLC4A7Q9Y6M7 1214 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms