RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 RNF26Q9BY78 433 aaPredicted RBP11.02□□□□□ -0.65
SPG11-214ENST00000558989 ALDH8A1Q9H2A2 487 aaPredicted RBP11.02□□□□□ -0.65
SPG11-214ENST00000558989 PRO3102Q9H379 93 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 EHMT1Q9H9B1 1298 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 C6orf50Q9HD87 102 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 NOD1Q9Y239 953 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 MYO9BQ13459 2157 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 hCG_1984214I3L0E3 225 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
SPG11-214ENST00000558989 TPD52L2O43399 206 aaKnown RBP11.01□□□□□ -0.65
SPG11-214ENST00000558989 FIBPO43427 364 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 NLRP5P59047 1200 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 C9orf50Q5SZB4 431 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 KCNV1Q6PIU1 500 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 CPLX2Q6PUV4 134 aaKnown RBP11.01□□□□□ -0.65
SPG11-214ENST00000558989 TEX2Q8IWB9 1127 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 ZNF713Q8N859 430 aaPredicted RBP11.01□□□□□ -0.65
SPG11-214ENST00000558989 PPTC7Q8NI37 304 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 KAT2BQ92831 832 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 LRCH3Q96II8 777 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 TOX2Q96NM4 488 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 TET1Q8NFU7 2136 aa11.01□□□□□ -0.65
SPG11-214ENST00000558989 SOX1O00570 391 aaPredicted RBP11□□□□□ -0.65
SPG11-214ENST00000558989 KIAA0355O15063 1070 aa11□□□□□ -0.65
SPG11-214ENST00000558989 CD4P01730 458 aa11□□□□□ -0.65
SPG11-214ENST00000558989 ACRP10323 421 aa11□□□□□ -0.65
SPG11-214ENST00000558989 PSEN2P49810 448 aa11□□□□□ -0.65
SPG11-214ENST00000558989 FXR1P51114 621 aaKnown RBP eCLIP11□□□□□ -0.65
SPG11-214ENST00000558989 EPHB4P54760 987 aa11□□□□□ -0.65
SPG11-214ENST00000558989 MTMR1Q13613 665 aa11□□□□□ -0.65
SPG11-214ENST00000558989 SHHQ15465 462 aa11□□□□□ -0.65
SPG11-214ENST00000558989 ME3Q16798 604 aa11□□□□□ -0.65
SPG11-214ENST00000558989 KIAA0753Q2KHM9 967 aa11□□□□□ -0.65
SPG11-214ENST00000558989 DPH6Q7L8W6 267 aa11□□□□□ -0.65
SPG11-214ENST00000558989 NOP9Q86U38 636 aaKnown RBP11□□□□□ -0.65
SPG11-214ENST00000558989 TRIM50Q86XT4 487 aa11□□□□□ -0.65
SPG11-214ENST00000558989 TDHQ8IZJ6 230 aa11□□□□□ -0.65
SPG11-214ENST00000558989 REXO1Q8N1G1 1221 aaKnown RBP11□□□□□ -0.65
SPG11-214ENST00000558989 ADAMTS19Q8TE59 1207 aa11□□□□□ -0.65
SPG11-214ENST00000558989 CCDC12Q8WUD4 166 aaPredicted RBP11□□□□□ -0.65
SPG11-214ENST00000558989 SCLYQ96I15 445 aa11□□□□□ -0.65
SPG11-214ENST00000558989 HIPK3Q9H422 1215 aa11□□□□□ -0.65
SPG11-214ENST00000558989 GJB4Q9NTQ9 266 aa11□□□□□ -0.65
SPG11-214ENST00000558989 TBX21Q9UL17 535 aa11□□□□□ -0.65
SPG11-214ENST00000558989 KCNJ14Q9UNX9 436 aa11□□□□□ -0.65
SPG11-214ENST00000558989 LAMA3Q16787 3333 aa11□□□□□ -0.65
SPG11-214ENST00000558989 KPNA6O60684 536 aa11□□□□□ -0.65
SPG11-214ENST00000558989 PFKFB2O60825 505 aa11□□□□□ -0.65
SPG11-214ENST00000558989 STAM2O75886 525 aa11□□□□□ -0.65
SPG11-214ENST00000558989 TIMP1P01033 207 aa11□□□□□ -0.65
SPG11-214ENST00000558989 ARP10275 920 aa11□□□□□ -0.65
SPG11-214ENST00000558989 TGFB3P10600 412 aa11□□□□□ -0.65
SPG11-214ENST00000558989 CSF2RAP15509 400 aa11□□□□□ -0.65
SPG11-214ENST00000558989 ICAM3P32942 547 aa11□□□□□ -0.65
SPG11-214ENST00000558989 CLK2P49760 499 aaKnown RBP11□□□□□ -0.65
SPG11-214ENST00000558989 ZNF200P98182 395 aaPredicted RBP11□□□□□ -0.65
SPG11-214ENST00000558989 FPGSQ05932 587 aa11□□□□□ -0.65
SPG11-214ENST00000558989 NEDD9Q14511 834 aa11□□□□□ -0.65
SPG11-214ENST00000558989 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
SPG11-214ENST00000558989 C7orf31Q8N865 590 aa11□□□□□ -0.65
SPG11-214ENST00000558989 SLC43A3Q8NBI5 491 aa11□□□□□ -0.65
SPG11-214ENST00000558989 CCDC148Q8NFR7 591 aa11□□□□□ -0.65
SPG11-214ENST00000558989 MXRA8Q9BRK3 442 aa11□□□□□ -0.65
SPG11-214ENST00000558989 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
SPG11-214ENST00000558989 ZMYND12Q9H0C1 365 aa11□□□□□ -0.65
SPG11-214ENST00000558989 HDAC6Q9UBN7 1215 aa11□□□□□ -0.65
SPG11-214ENST00000558989 UBIAD1Q9Y5Z9 338 aa11□□□□□ -0.65
SPG11-214ENST00000558989 GBF1Q92538 1859 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 LOXHD1Q8IVV2 1947 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 DEXIO95424 95 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 FOSP01100 380 aaPredicted RBP10.99□□□□□ -0.65
SPG11-214ENST00000558989 LGALS2P05162 132 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 GNA11P29992 359 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 BMP8BP34820 402 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 SETQ01105 290 aaPredicted RBP10.99□□□□□ -0.65
SPG11-214ENST00000558989 AP3B2Q13367 1082 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 ANKRD1Q15327 319 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 PTGISQ16647 500 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 GDF6Q6KF10 455 aaPredicted RBP10.99□□□□□ -0.65
SPG11-214ENST00000558989 EMID1Q96A84 441 aaPredicted RBP10.99□□□□□ -0.65
SPG11-214ENST00000558989 GPRASP2Q96D09 838 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 JADE2Q9NQC1 790 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 KCNH7Q9NS40 1196 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 EVPLQ92817 2033 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 SZT2Q5T011 3432 aa10.99□□□□□ -0.65
SPG11-214ENST00000558989 CTDNEP1O95476 244 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 KCNA2P16389 499 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 MARK3P27448 753 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 SSTR3P32745 418 aaPredicted RBP10.98□□□□□ -0.65
SPG11-214ENST00000558989 XRRA1Q6P2D8 792 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 METTL7BQ6UX53 244 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 DEFB128Q7Z7B8 93 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 PLA2G4DQ86XP0 818 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 GPR20Q99678 358 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 GLT8D2Q9H1C3 349 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 TANC1Q9C0D5 1861 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 FAM86B1E9PN63 330 aa10.98□□□□□ -0.65
SPG11-214ENST00000558989 JAK2O60674 1132 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms