RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 DISC1Q9NRI5 854 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 NRBP1Q9UHY1 535 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 WDR64B1ANS9 1081 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 RPA1P27694 616 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 CCT6AP40227 531 aaKnown RBP20.3■□□□□ 0.84
CLPX-203ENST00000558958 JAK3P52333 1124 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 PRMT2P55345 433 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 CCDC144BQ3MJ40 725 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 HYIQ5T013 277 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 SMAP1Q8IYB5 467 aaPredicted RBP20.3■□□□□ 0.84
CLPX-203ENST00000558958 CALML4Q96GE6 196 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 PYM1Q9BRP8 204 aaKnown RBP20.3■□□□□ 0.84
CLPX-203ENST00000558958 POLR3CQ9BUI4 534 aaPredicted RBP20.3■□□□□ 0.84
CLPX-203ENST00000558958 CCDC39Q9UFE4 941 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 SORBS3O60504 671 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 MED24O75448 989 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 SPATA31C1P0DKV0 1188 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 ACTR2P61160 394 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 GRB10Q13322 594 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 ZRSR1Q15695 479 aaKnown RBP20.29■□□□□ 0.84
CLPX-203ENST00000558958 E2F4Q16254 413 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 DUSP28Q4G0W2 176 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 CATSPER3Q86XQ3 398 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 RASSF8Q8NHQ8 419 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 COPS5Q92905 334 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 PNMA5Q96PV4 448 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 MLXIPQ9HAP2 919 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 DDX19AQ9NUU7 478 aaKnown RBP20.29■□□□□ 0.84
CLPX-203ENST00000558958 TELO2Q9Y4R8 837 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 SAMM50Q9Y512 469 aa20.29■□□□□ 0.84
CLPX-203ENST00000558958 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.28■□□□□ 0.84
CLPX-203ENST00000558958 ADCY3O60266 1144 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 KINO60870 393 aaKnown RBP20.28■□□□□ 0.84
CLPX-203ENST00000558958 SLITRK3O94933 977 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 SMPD1P17405 629 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 PLCG1P19174 1290 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 ECM1Q16610 540 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 LONRF3Q496Y0 759 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 TMEM119Q4V9L6 283 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 RRAGBQ5VZM2 374 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 DHX37Q8IY37 1157 aaKnown RBP20.28■□□□□ 0.84
CLPX-203ENST00000558958 IQUBQ8NA54 791 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 RAET1EQ8TD07 263 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 NEK9Q8TD19 979 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 PXYLP1Q8TE99 480 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 DHX58Q96C10 678 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 TIGD1Q96MW7 591 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 TUFT1Q9NNX1 390 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 RGL1Q9NZL6 768 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 USP25Q9UHP3 1055 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 KDM3AQ9Y4C1 1321 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 PCDHA10Q9Y5I2 948 aa20.28■□□□□ 0.84
CLPX-203ENST00000558958 DOCK5Q9H7D0 1870 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 POTEB3A0JP26 581 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 NKRFO15226 690 aaKnown RBP eCLIP20.27■□□□□ 0.84
CLPX-203ENST00000558958 ACTN4O43707 911 aaKnown RBP20.27■□□□□ 0.84
CLPX-203ENST00000558958 ATG7O95352 703 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 CYBAP13498 195 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 ELNP15502 786 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 SP4Q02446 784 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 TNFAIP2Q03169 654 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 ARHGAP1Q07960 439 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 NAALADL2Q58DX5 795 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 CAVIN1Q6NZI2 390 aaKnown RBP20.27■□□□□ 0.84
CLPX-203ENST00000558958 POTEBQ6S5H4 581 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 ABHD15Q6UXT9 468 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 TRPV1Q8NER1 839 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 LRRC15Q8TF66 581 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 EMID1Q96A84 441 aaPredicted RBP20.27■□□□□ 0.84
CLPX-203ENST00000558958 DYDC2Q96IM9 177 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 CDK5RAP3Q96JB5 506 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 PLIN2Q99541 437 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 NT5C3AQ9H0P0 336 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
CLPX-203ENST00000558958 ADCY6O43306 1168 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 GH1P01241 217 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 P4HBP07237 508 aaKnown RBP20.26■□□□□ 0.83
CLPX-203ENST00000558958 SLFN14P0C7P3 912 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 MUTP22033 750 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 STAT6P42226 847 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 CYP4A11Q02928 519 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 LAMC2Q13753 1193 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 GJC2Q5T442 439 aaPredicted RBP20.26■□□□□ 0.83
CLPX-203ENST00000558958 KRBA2Q6ZNG9 492 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 TMEM63CQ9P1W3 806 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 SERTAD1Q9UHV2 236 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 KIAA1024Q9UPX6 916 aa20.26■□□□□ 0.83
CLPX-203ENST00000558958 GSTTP1A0A1W2PQM5 241 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 HMGCRP04035 888 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 PSAPP07602 524 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 PTGS1P23219 599 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 CACNB2Q08289 660 aaPredicted RBP20.25■□□□□ 0.83
CLPX-203ENST00000558958 TRIM32Q13049 653 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 CTTNQ14247 550 aaKnown RBP20.25■□□□□ 0.83
CLPX-203ENST00000558958 HSDL1Q3SXM5 330 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 MIS18BP1Q6P0N0 1132 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 PDXDC2PQ6P474 469 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 KCTD17Q8N5Z5 321 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 CNNM3Q8NE01 707 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 SEPT1Q8WYJ6 367 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms