RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 CTC1Q2NKJ3 1217 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 TAF2Q6P1X5 1199 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 CWC27Q6UX04 472 aaKnown RBP12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 ALYREFQ86V81 257 aaKnown RBP12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 STAG2Q8N3U4 1231 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 CLP1Q92989 425 aaKnown RBP12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 PPP2R3CQ969Q6 453 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 MFSD14AQ96MC6 490 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 UIMC1Q96RL1 719 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 ATG2AQ2TAZ0 1938 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 TRIOO75962 3097 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 DOCK5Q9H7D0 1870 aa12.19□□□□□ -0.46
CTDSPL2-203ENST00000558791 PNMA6FA0A0J9YX94 578 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 HOXA13P31271 388 aaPredicted RBP12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 CTNNB1P35222 781 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 RRP1P56182 461 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 TRDNQ13061 729 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 SMAD2Q15796 467 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 PKN1Q16512 942 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 NAALADL2Q58DX5 795 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 RSPH3Q86UC2 560 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 IL31RAQ8NI17 732 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 GPR20Q99678 358 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
CTDSPL2-203ENST00000558791 ADGRA3Q8IWK6 1321 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 ERICH2A1L162 156 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 GABBR2O75899 941 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 MRE11P49959 708 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 MRPS9P82933 396 aaKnown RBP12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 NHLH1Q02575 133 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 GRM4Q14833 912 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 HERC4Q5GLZ8 1057 aaPredicted RBP12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 CYFIP1Q7L576 1253 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 PLEKHM2Q8IWE5 1019 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 P2RX5Q93086 422 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 CDHR1Q96JP9 859 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 PRRX2Q99811 253 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 RWDD1Q9H446 243 aaPredicted RBP12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 EHMT1Q9H9B1 1298 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 SETD4Q9NVD3 440 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 SQORQ9Y6N5 450 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 WDFY4Q6ZS81 3184 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 C5orf42Q9H799 3197 aa12.17□□□□□ -0.46
CTDSPL2-203ENST00000558791 MBTPS2O43462 519 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 CTSHP09668 335 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 IRS1P35568 1242 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 LTBRP36941 435 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 ARHGAP4P98171 946 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 SMAD4Q13485 552 aaKnown RBP12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 SART3Q15020 963 aaKnown RBP12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 PCNX4Q63HM2 1172 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 BMP8AQ7Z5Y6 402 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 NLRX1Q86UT6 975 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 HOMER1Q86YM7 354 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 LMBR1Q8WVP7 490 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 GPKOWQ92917 476 aaPredicted RBP eCLIP12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 TNPO1Q92973 898 aaKnown RBP12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 CUL5Q93034 780 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 ZNF689Q96CS4 500 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 PIGSQ96S52 555 aa12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 RC3H2Q9HBD1 1191 aaKnown RBP12.16□□□□□ -0.46
CTDSPL2-203ENST00000558791 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
CTDSPL2-203ENST00000558791 SORBS3O60504 671 aa12.15□□□□□ -0.46
CTDSPL2-203ENST00000558791 MMP1P03956 469 aa12.15□□□□□ -0.46
CTDSPL2-203ENST00000558791 LINC00271P0C7V0 271 aa12.15□□□□□ -0.46
CTDSPL2-203ENST00000558791 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
CTDSPL2-203ENST00000558791 FBXL18Q96ME1 805 aa12.15□□□□□ -0.46
CTDSPL2-203ENST00000558791 MAP3K14Q99558 947 aa12.15□□□□□ -0.46
CTDSPL2-203ENST00000558791 FTHL17Q9BXU8 183 aa12.15□□□□□ -0.46
CTDSPL2-203ENST00000558791 TECTAO75443 2155 aa12.15□□□□□ -0.47
CTDSPL2-203ENST00000558791 PIK3CDO00329 1044 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 ENPP3O14638 875 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 MAFGO15525 162 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 EYA4O95677 639 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 CHRNA1P02708 482 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 NUCB1Q02818 461 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 MGAT3Q09327 533 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 HYAL1Q12794 435 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 ADAM15Q13444 863 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 BTG3Q14201 252 aaPredicted RBP12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 TSHZ1Q6ZSZ6 1077 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 CYB5R4Q7L1T6 521 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 CMTR2Q8IYT2 770 aaKnown RBP12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 SEPT1Q8WYJ6 367 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 GPRASP2Q96D09 838 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 ERAP1Q9NZ08 941 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 CD207Q9UJ71 328 aa12.14□□□□□ -0.47
CTDSPL2-203ENST00000558791 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
CTDSPL2-203ENST00000558791 MBLAC1A4D2B0 266 aaPredicted RBP12.13□□□□□ -0.47
CTDSPL2-203ENST00000558791 RRN3P2A6NIE6 340 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms