RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 RASGRP2Q7LDG7 609 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 SLC9A9Q8IVB4 645 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 ZNF444Q8N0Y2 327 aaPredicted RBP11.46□□□□□ -0.57
SPG11-212ENST00000558790 HERVK_113Q902F9 699 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 ANKS1AQ92625 1134 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 HIPK3Q9H422 1215 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 IL23AQ9NPF7 189 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 RNF146Q9NTX7 359 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 GNEQ9Y223 722 aaKnown RBP11.46□□□□□ -0.57
SPG11-212ENST00000558790 GRIN2DO15399 1336 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 TMEM232C9JQI7 657 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 APPP05067 770 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 TSPY3P0CV98 308 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 TSPY8P0CW00 308 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 GNAT2P19087 354 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 RAB30Q15771 203 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 FSCN1Q16658 493 aaKnown RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 C20orf194Q5TEA3 1177 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 TMEM214Q6NUQ4 689 aaKnown RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 NOL8Q76FK4 1167 aaKnown RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 PRICKLE2Q7Z3G6 844 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 FBXO16Q8IX29 292 aaPredicted RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 SLC43A3Q8NBI5 491 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 CLP1Q92989 425 aaKnown RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 CHMP4CQ96CF2 233 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 GPATCH3Q96I76 525 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 GRIP2Q9C0E4 1043 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 WNT8AQ9H1J5 351 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 NKX2-4Q9H2Z4 354 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 CHMP4BQ9H444 224 aaKnown RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 ZNF287Q9HBT7 754 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 GMPR2Q9P2T1 348 aaKnown RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 YBX2Q9Y2T7 364 aaKnown RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 ZFHX2Q9C0A1 2572 aaPredicted RBP11.45□□□□□ -0.58
SPG11-212ENST00000558790 MYH7BA7E2Y1 1941 aa11.45□□□□□ -0.58
SPG11-212ENST00000558790 VPS13AQ96RL7 3174 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 B4GALT4O60513 344 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 ZFYP08048 801 aaPredicted RBP11.44□□□□□ -0.58
SPG11-212ENST00000558790 CCL23P55773 120 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 FOXK2Q01167 660 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 IKQ13123 557 aaPredicted RBP11.44□□□□□ -0.58
SPG11-212ENST00000558790 ITGA7Q13683 1181 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 OTOP2Q7RTS6 562 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 IFNL3Q8IZI9 196 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 NEDD1Q8NHV4 660 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 GMCL1Q96IK5 515 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 FBXL18Q96ME1 805 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 SEC62Q99442 399 aaKnown RBP11.44□□□□□ -0.58
SPG11-212ENST00000558790 NOC4LQ9BVI4 516 aaKnown RBP11.44□□□□□ -0.58
SPG11-212ENST00000558790 MSRAQ9UJ68 235 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 DNMT3LQ9UJW3 386 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 SIP14410 1827 aa11.44□□□□□ -0.58
SPG11-212ENST00000558790 ASB14A6NK59 587 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 ALAS1P13196 640 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 GPC1P35052 558 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 SLC1A4P43007 532 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 RABGGTBP53611 331 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 SNAP25P60880 206 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 PSMC6P62333 389 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 PDE4BQ07343 736 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 PPARAQ07869 468 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 MUM1L1Q5H9M0 696 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 TMEM63BQ5T3F8 832 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 KCTD1Q719H9 257 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 EEPD1Q7L9B9 569 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 FAM160B2Q86V87 743 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 VWCEQ96DN2 955 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 TRERF1Q96PN7 1200 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 TRPV6Q9H1D0 765 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 MTIF3Q9H2K0 278 aaKnown RBP11.43□□□□□ -0.58
SPG11-212ENST00000558790 PDGFCQ9NRA1 345 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 CYP39A1Q9NYL5 469 aa11.43□□□□□ -0.58
SPG11-212ENST00000558790 PATL2C9JE40 543 aaKnown RBP11.42□□□□□ -0.58
SPG11-212ENST00000558790 PI4K2BG5E9Z4 385 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 FOXP2O15409 715 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 NMT2O60551 498 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 CABYRO75952 493 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 FGBP02675 491 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 PDIA4P13667 645 aaKnown RBP11.42□□□□□ -0.58
SPG11-212ENST00000558790 RHOQP17081 205 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 MCCP23508 829 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 TFAP4Q01664 338 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 TKFCQ3LXA3 575 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 TAPT1Q6NXT6 567 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 CHURC1Q8WUH1 139 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 STAG1Q8WVM7 1258 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 SCLYQ96I15 445 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 NACAP1Q9BZK3 213 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 AP5M1Q9H0R1 490 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 NAPBQ9H115 298 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 SLC28A3Q9HAS3 691 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 RCAN3Q9UKA8 241 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 PRR12Q9ULL5 1215 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 STX8Q9UNK0 236 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 MICAL3Q7RTP6 2002 aa11.42□□□□□ -0.58
SPG11-212ENST00000558790 CDK2AP1O14519 115 aa11.41□□□□□ -0.58
SPG11-212ENST00000558790 DYNC1LI2O43237 492 aaPredicted RBP11.41□□□□□ -0.58
SPG11-212ENST00000558790 MYOGP15173 224 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms