RNA–Protein interactions for RNA: ENST00000558737.2

HMGN1P26-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 26, humanhuman

BASIC

Gene HMGN1P26, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P26-201ENST00000558737 VN1R2Q8NFZ6 395 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 SPPL3Q8TCT6 385 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 APPBP2Q92624 585 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 APBB2Q92870 758 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 CLP1Q92989 425 aaKnown RBP8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 NEK1Q96PY6 1258 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 RMDN3Q96TC7 470 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 SEC62Q99442 399 aaKnown RBP8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 SETD4Q9NVD3 440 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 R4GN57 208 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 CHD6Q8TD26 2715 aa8.1□□□□□ -1.11
HMGN1P26-201ENST00000558737 CCDC171Q6TFL3 1326 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 FNDC1Q4ZHG4 1894 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 C2CD4DB7Z1M9 353 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 WEE2P0C1S8 567 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 GNAT2P19087 354 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 CA8P35219 290 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 NUBP1P53384 320 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 SP4Q02446 784 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 LAMC2Q13753 1193 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 ANGPT1Q15389 498 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 PLPP4Q5VZY2 271 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 TRIM50Q86XT4 487 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 SYTL5Q8TDW5 730 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 NSUN6Q8TEA1 469 aaKnown RBP8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 RIN2Q8WYP3 895 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 PLVAPQ9BX97 442 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 UBA5Q9GZZ9 404 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 RNPEPQ9H4A4 650 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 RC3H2Q9HBD1 1191 aaKnown RBP8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 SORCS3Q9UPU3 1222 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 ATRXP46100 2492 aa8.09□□□□□ -1.11
HMGN1P26-201ENST00000558737 OTOGLQ3ZCN5 2332 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 USP24Q9UPU5 2620 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 PATL2C9JE40 543 aaKnown RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 H3BRB1 525 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 STK25O00506 426 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 RNF113AO15541 343 aaKnown RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 PI15O43692 258 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 DHX16O60231 1041 aaKnown RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 DGKIO75912 1065 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 CFBP00751 764 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 LGALS2P05162 132 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 ATF7P17544 494 aaPredicted RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 APOBRQ0VD83 1088 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 PUM1Q14671 1186 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 CDC37Q16543 378 aaPredicted RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 ST3GAL2Q16842 350 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 PPP4R3BQ5MIZ7 849 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 UTP14CQ5TAP6 766 aaKnown RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 CWF19L1Q69YN2 538 aaKnown RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 DCLK2Q8N568 766 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 CYP2W1Q8TAV3 490 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 PANK1Q8TE04 598 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 SUSD6Q92537 303 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 P2RX5Q93086 422 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 ZNF689Q96CS4 500 aaPredicted RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 TMEM47Q9BQJ4 181 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 C16orf70Q9BSU1 422 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 TUT1Q9H6E5 874 aaKnown RBP8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 MLXIPQ9HAP2 919 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 HCSTQ9UBK5 93 aa8.08□□□□□ -1.12
HMGN1P26-201ENST00000558737 WDR19Q8NEZ3 1342 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 NOP56O00567 594 aaKnown RBP8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 ENPP3O14638 875 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 LMNAP02545 664 aaKnown RBP8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 CHRNA1P02708 482 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 NR3C2P08235 984 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 SRGAP2BP0DMP2 458 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 PDHBP11177 359 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 TOP1P11387 765 aaKnown RBP8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 UBA1P22314 1058 aaKnown RBP8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 RFX1P22670 979 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 ERVFC1P60507 584 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 LPIN1Q14693 890 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 RSPO4Q2I0M5 234 aaPredicted RBP8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 MYSM1Q5VVJ2 828 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 ANKRD54Q6NXT1 300 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 BTNL9Q6UXG8 535 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 RUFY4Q6ZNE9 571 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 UBALD2Q8IYN6 164 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 KBTBD3Q8NAB2 608 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 LINC01599Q8WXQ3 324 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 EMID1Q96A84 441 aaPredicted RBP8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 POMKQ9H5K3 350 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 BCAS3Q9H6U6 928 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 PXMP2Q9NR77 195 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 NR2E1Q9Y466 385 aa8.07□□□□□ -1.12
HMGN1P26-201ENST00000558737 HMMRO75330 724 aa8.06□□□□□ -1.12
HMGN1P26-201ENST00000558737 PPFIA4O75335 1185 aa8.06□□□□□ -1.12
HMGN1P26-201ENST00000558737 EIF3JO75822 258 aaKnown RBP8.06□□□□□ -1.12
HMGN1P26-201ENST00000558737 CD52P31358 61 aa8.06□□□□□ -1.12
HMGN1P26-201ENST00000558737 SP2Q02086 613 aa8.06□□□□□ -1.12
HMGN1P26-201ENST00000558737 ZNF543Q08ER8 600 aa8.06□□□□□ -1.12
HMGN1P26-201ENST00000558737 COL9A2Q14055 689 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P26-201ENST00000558737 DUSP6Q16828 381 aa8.06□□□□□ -1.12
HMGN1P26-201ENST00000558737 SPECC1Q5M775 1068 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms