RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 CXCL10P02778 98 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 GNAT1P11488 350 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 FOSL2P15408 326 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 ATP2A2P16615 1042 aaKnown RBP17.7■□□□□ 0.42
CSHL1-208ENST00000558609 TCF7P36402 384 aaPredicted RBP17.7■□□□□ 0.42
CSHL1-208ENST00000558609 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
CSHL1-208ENST00000558609 GRIN2CQ14957 1233 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 CEP55Q53EZ4 464 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 ZNF618Q5T7W0 954 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 TRIM50Q86XT4 487 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 CYP2W1Q8TAV3 490 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 PHOSPHO2Q8TCD6 241 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 ATP6V0A1Q93050 837 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 PHKBQ93100 1093 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 ZNF274Q96GC6 653 aaPredicted RBP17.7■□□□□ 0.42
CSHL1-208ENST00000558609 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
CSHL1-208ENST00000558609 MEIS1O00470 390 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 TREHO43280 583 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 NBNO60934 754 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 BAIAP3O94812 1187 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 CCT2P78371 535 aaKnown RBP17.69■□□□□ 0.42
CSHL1-208ENST00000558609 NIPA1Q7RTP0 329 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 CRYGNQ8WXF5 182 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 NCOA5Q9HCD5 579 aaKnown RBP17.69■□□□□ 0.42
CSHL1-208ENST00000558609 SETD4Q9NVD3 440 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 PKD2L1Q9P0L9 805 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 YBX2Q9Y2T7 364 aaKnown RBP17.69■□□□□ 0.42
CSHL1-208ENST00000558609 PCDHA11Q9Y5I1 949 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 NFASCO94856 1347 aa17.69■□□□□ 0.42
CSHL1-208ENST00000558609 CYP3A4P08684 503 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 ARP10275 920 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 GNA11P29992 359 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 RABGGTBP53611 331 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 ADAM17P78536 824 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 ARHGAP4P98171 946 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 JAKMIP3Q5VZ66 844 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 CNKSR3Q6P9H4 555 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 USP38Q8NB14 1042 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 SLC9A7Q96T83 725 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 UPF3BQ9BZI7 483 aaKnown RBP17.68■□□□□ 0.42
CSHL1-208ENST00000558609 SMARCAD1Q9H4L7 1026 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 JPH1Q9HDC5 661 aaPredicted RBP17.68■□□□□ 0.42
CSHL1-208ENST00000558609 SLC9A2Q9UBY0 812 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 CHD9Q3L8U1 2897 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 NRCAMQ92823 1304 aa17.68■□□□□ 0.42
CSHL1-208ENST00000558609 ADAMTS3O15072 1205 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 CAND2O75155 1236 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 LGR5O75473 907 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 THPOP40225 353 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 MBTPS1Q14703 1052 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
CSHL1-208ENST00000558609 SDF4Q9BRK5 362 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 NKX2-4Q9H2Z4 354 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 SLC28A3Q9HAS3 691 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 AGO4Q9HCK5 861 aaKnown RBP17.67■□□□□ 0.42
CSHL1-208ENST00000558609 PDRG1Q9NUG6 133 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 ERAP1Q9NZ08 941 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 EMSYQ7Z589 1322 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 GBF1Q92538 1859 aa17.67■□□□□ 0.42
CSHL1-208ENST00000558609 MYO9BQ13459 2157 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 RSPH10B2B2RC85 870 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 PPFIA3O75145 1194 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 RSPH10BP0C881 870 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 ZNF76P36508 570 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 CCDC148Q8NFR7 591 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 BICD2Q8TD16 824 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 LMBR1Q8WVP7 490 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 GLG1Q92896 1179 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 PCYT2Q99447 389 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 SH3GLB2Q9NR46 395 aa17.66■□□□□ 0.42
CSHL1-208ENST00000558609 ABHD14A-ACY1A0A1B0GW23 586 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 FAM86B1E9PN63 330 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 EFCAB14O75071 495 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 ATG7O95352 703 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 FAM86B2P0C5J1 330 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 MYOGP15173 224 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 ANAPC15P60006 121 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 ACTR2P61160 394 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 WDR5P61964 334 aaKnown RBP17.65■□□□□ 0.42
CSHL1-208ENST00000558609 SSRP1Q08945 709 aaKnown RBP17.65■□□□□ 0.42
CSHL1-208ENST00000558609 ITGB3BPQ13352 177 aaPredicted RBP17.65■□□□□ 0.42
CSHL1-208ENST00000558609 HERC6Q8IVU3 1022 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 TRIM22Q8IYM9 498 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 LARP6Q9BRS8 491 aaKnown RBP17.65■□□□□ 0.42
CSHL1-208ENST00000558609 KAT6AQ92794 2004 aa17.65■□□□□ 0.42
CSHL1-208ENST00000558609 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 CPLX1O14810 134 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 KCNJ6P48051 423 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 PPFIA1Q13136 1202 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 IKBKEQ14164 716 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 TCTN1Q2MV58 587 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 FAM26DQ5JW98 314 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 RPAINQ86UA6 219 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 PLA2G4DQ86XP0 818 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 PRDM12Q9H4Q4 367 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 AZI2Q9H6S1 392 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 VPS54Q9P1Q0 977 aa17.64■□□□□ 0.41
CSHL1-208ENST00000558609 MBLAC1A4D2B0 266 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms