RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SPTBN5Q9NRC6 3674 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 LCHNA4D1U4 455 aa15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 EPOPA6NHQ4 379 aa15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 ZBTB43O43298 467 aa15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 FOSP01100 380 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 RPLP2P05387 115 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 ITGB5P18084 799 aa15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 FGD1P98174 961 aa15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 MYOCDQ8IZQ8 938 aa15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 JADE2Q9NQC1 790 aa15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 UBIAD1Q9Y5Z9 338 aa15.59■□□□□ 0.09
SNRPA1-204ENST00000558020 PRRC2BQ5JSZ5 2229 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 hCG_1642624A0A1W2PR95 340 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 LINC01553A4QN01 128 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 ATP9AO75110 1047 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 ARHGEF15O94989 841 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 CTSHP09668 335 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 BMP1P13497 986 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 KCNA2P16389 499 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 NAPAP54920 295 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 RTN1Q16799 776 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 TCTN1Q2MV58 587 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 TSGA10IPQ3SY00 556 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 FAM26DQ5JW98 314 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 APOA5Q6Q788 366 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 TRIM50Q86XT4 487 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 RAB11FIP4Q86YS3 637 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 LMBR1Q8WVP7 490 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 SAMD11Q96NU1 681 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 AZI2Q9H6S1 392 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 SUGCTQ9HAC7 445 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 MTUS1Q9ULD2 1270 aa15.58■□□□□ 0.08
SNRPA1-204ENST00000558020 KAT6AQ92794 2004 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 CCDC196A0A1B0GTZ2 297 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 RRN3P2A6NIE6 340 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 hCG_1984214I3L0E3 225 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 ADAM17P78536 824 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 EXOSC10Q01780 885 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 TFF2Q03403 129 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 PPFIA1Q13136 1202 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 UBE2SQ16763 222 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 PPP1R18Q6NYC8 613 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 RPAINQ86UA6 219 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 ZNF713Q8N859 430 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 TOP1MTQ969P6 601 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 YME1L1Q96TA2 773 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 SDF4Q9BRK5 362 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 IFIH1Q9BYX4 1025 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 RIC8AQ9NPQ8 531 aa15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 V9GY48 417 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-204ENST00000558020 GSTTP1A0A1W2PQM5 241 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 LPXNO60711 386 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 CDC45O75419 566 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 ADCY7P51828 1080 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 HTRA4P83105 476 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 PTPROQ16827 1216 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 KRT40Q6A162 431 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 FBXO22Q8NEZ5 403 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 MXRA8Q9BRK3 442 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 JPH1Q9HDC5 661 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 KCNH7Q9NS40 1196 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 PKD2L1Q9P0L9 805 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 TUBE1Q9UJT0 475 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 REV3LO60673 3130 aa15.56■□□□□ 0.08
SNRPA1-204ENST00000558020 BDP1A6H8Y1 2624 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 UPP2O95045 317 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 ZNF76P36508 570 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 RCAN1P53805 252 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 GRIK4Q16099 956 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 IER5Q5VY09 327 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 MCTP2Q6DN12 878 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 GDPD5Q8WTR4 605 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 SLC9A2Q9UBY0 812 aa15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 NAP1L2Q9ULW6 460 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-204ENST00000558020 NCOR1O75376 2440 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 XIRP2A4UGR9 3374 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 KLF18A0A0U1RQI7 1052 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 SMCO2A6NFE2 343 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 GOLGA8AA7E2F4 631 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 GOLGA8BA8MQT2 603 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 CHRNA1P02708 482 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 MARK3P27448 753 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 MKRN4PQ13434 485 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 COL9A3Q14050 684 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 CEP55Q53EZ4 464 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 WWC2Q6AWC2 1192 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 IL17RAQ96F46 866 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 BARHL2Q9NY43 387 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 BRPF3Q9ULD4 1205 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 TELO2Q9Y4R8 837 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 DOCK5Q9H7D0 1870 aa15.54■□□□□ 0.08
SNRPA1-204ENST00000558020 PTPRSQ13332 1948 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 NFASCO94856 1347 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 MBLAC1A4D2B0 266 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 M0QZ92 97 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 SLC26A2P50443 739 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 KCNQ1P51787 676 aa15.53■□□□□ 0.08
SNRPA1-204ENST00000558020 AP3B2Q13367 1082 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms