RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 CREG2Q8IUH2 290 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 PHF20Q9BVI0 1012 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 TRIM6Q9C030 488 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 YY1AP1Q9H869 796 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 INTS9Q9NV88 658 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 ITIH6Q6UXX5 1313 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 CHRNDQ07001 517 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 CCDC6Q16204 474 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 DENND2CQ68D51 928 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 DHTKD1Q96HY7 919 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 TRIM51Q9BSJ1 452 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 RTCBQ9Y3I0 505 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 L3MBTL1Q9Y468 752 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 KLRF2D3W0D1 207 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 UPP2O95045 317 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 TBC1D10BQ4KMP7 808 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 TGFBRAP1Q8WUH2 860 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 NARFQ9UHQ1 456 aa11.93□□□□□ -0.5
CCDC85C-207ENST00000557769 ACTN1P12814 892 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 AARSP49588 968 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 MAN2A1Q16706 1144 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 KCNV1Q6PIU1 500 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 MYOCDQ8IZQ8 938 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 COA7Q96BR5 231 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 TMEM260Q9NX78 707 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 CHORDC1Q9UHD1 332 aaPredicted RBP11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 A6NNZ2 444 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 ERVV-1B6SEH8 477 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 RGL2O15211 777 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 MMEP08473 750 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 GYS1P13807 737 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 TUBB8Q3ZCM7 444 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 CYB5D1Q6P9G0 228 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 ZKSCAN4Q969J2 545 aaPredicted RBP11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 SEC16BQ96JE7 1060 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 HMGB1P1B2RPK0 211 aaPredicted RBP11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 CLIC2O15247 247 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 TTI1O43156 1089 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 NT5DC1Q5TFE4 455 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 APTXQ7Z2E3 356 aaKnown RBP11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 VSIG1Q86XK7 387 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 AENQ8WTP8 325 aaKnown RBP11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 MTRQ99707 1265 aa11.92□□□□□ -0.5
CCDC85C-207ENST00000557769 ZNF233A6NK53 670 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 MEIS1O00470 390 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 FGGP02679 453 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 ADAM9Q13443 819 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 TRIP13Q15645 432 aaPredicted RBP11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 IFI16Q16666 785 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 FAM83BQ5T0W9 1011 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 PHLDB2Q86SQ0 1253 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 KLHL29Q96CT2 875 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 NSRP1Q9H0G5 558 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 PDHA1P08559 390 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 LACTBP83111 547 aaPredicted RBP11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 PKN1Q16512 942 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 CCDC105Q8IYK2 499 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 CNPY4Q8N129 248 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 PCDHA4Q9UN74 947 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 COL4A1P02462 1669 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 ADAMTS3O15072 1205 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 CETN3O15182 167 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 SART1O43290 800 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 DIAPH2O60879 1101 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 GFPT2O94808 682 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 CYP4A11Q02928 519 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 PDXDC2PQ6P474 469 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 SUGP1Q8IWZ8 645 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 TAB3Q8N5C8 712 aaPredicted RBP11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 DNAJC7Q99615 494 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
CCDC85C-207ENST00000557769 LRRN2O75325 713 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 RPS6KA5O75582 802 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 PBX1P40424 430 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 PPP2R2AP63151 447 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 TRAPPC3LQ5T215 181 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 SPATS2Q86XZ4 545 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 IRF2BP1Q8IU81 584 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 REXO1Q8N1G1 1221 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 CTTNBP2NLQ9P2B4 639 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 TACC3Q9Y6A5 838 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 NKRFO15226 690 aaKnown RBP eCLIP11.9□□□□□ -0.53e-6■■■□□ 16.7
CCDC85C-207ENST00000557769 CHMP2AO43633 222 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 ACSL3O95573 720 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 HSD17B3P37058 310 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 SNX1Q13596 522 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 GNPTABQ3T906 1256 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 FAM26FQ5R3K3 315 aa11.9□□□□□ -0.5
CCDC85C-207ENST00000557769 FAM47EQ6ZV65 393 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms