RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 TRAV20A0A0B4J274 112 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 C1QTNF3-AMACRE9PGA6 284 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 NKRFO15226 690 aaKnown RBP eCLIP4.54□□□□□ -1.68
GPHN-216ENST00000557678 GPR42O15529 346 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 SOD2P04179 222 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 ENO2P09104 434 aaPredicted RBP4.54□□□□□ -1.68
GPHN-216ENST00000557678 PABPC1P11940 636 aaKnown RBP4.54□□□□□ -1.68
GPHN-216ENST00000557678 FAHP16930 419 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 GDF5P43026 501 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 ZNF568Q3ZCX4 644 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 SLFN13Q68D06 897 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 LBX2Q6XYB7 198 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.54□□□□□ -1.68
GPHN-216ENST00000557678 IFNL2Q8IZJ0 200 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 GIMAP8Q8ND71 665 aaPredicted RBP4.54□□□□□ -1.68
GPHN-216ENST00000557678 TTLL11Q8NHH1 800 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 SGSM3Q96HU1 749 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 LRRC37BQ96QE4 947 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 ALG1Q9BT22 464 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 CDIP1Q9H305 208 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 TSC22D4Q9Y3Q8 395 aa4.54□□□□□ -1.68
GPHN-216ENST00000557678 CCDC9Q9Y3X0 531 aaKnown RBP4.54□□□□□ -1.68
GPHN-216ENST00000557678 FAM47E-STBD1D6RA91 191 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 U2SURPO15042 1029 aaKnown RBP4.53□□□□□ -1.68
GPHN-216ENST00000557678 EPHB4P54760 987 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 GPR85P60893 370 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 PFKPQ01813 784 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 HS1BP3Q53T59 392 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 CD276Q5ZPR3 534 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 PKN3Q6P5Z2 889 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 Q6ZUG5 572 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 DPH6Q7L8W6 267 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 PROSER1Q86XN7 944 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 LRRC47Q8N1G4 583 aaKnown RBP4.53□□□□□ -1.68
GPHN-216ENST00000557678 DTX3Q8N9I9 347 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 UHMK1Q8TAS1 419 aaKnown RBP4.53□□□□□ -1.68
GPHN-216ENST00000557678 TACO1Q9BSH4 297 aaKnown RBP4.53□□□□□ -1.68
GPHN-216ENST00000557678 ARHGEF4Q9NR80 690 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 ADAM29Q9UKF5 820 aa4.53□□□□□ -1.68
GPHN-216ENST00000557678 CCDC85CA6NKD9 419 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 H0Y858 1186 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 MUSKO15146 869 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 ZNF623O75123 536 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 AMHP03971 560 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 FGFR1P11362 822 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 TACR2P21452 398 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 YOD1Q5VVQ6 348 aaPredicted RBP4.52□□□□□ -1.69
GPHN-216ENST00000557678 USP51Q70EK9 711 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 KCTD1Q719H9 257 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 MTDHQ86UE4 582 aaKnown RBP4.52□□□□□ -1.69
GPHN-216ENST00000557678 ZNF428Q96B54 188 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 IPO9Q96P70 1041 aaKnown RBP4.52□□□□□ -1.69
GPHN-216ENST00000557678 GNRHR2Q96P88 292 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 LMF1Q96S06 567 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 CDC6Q99741 560 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 ZFYVE21Q9BQ24 234 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 CD244Q9BZW8 370 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 VPS11Q9H270 941 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 IPPKQ9H8X2 491 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 ARHGAP28Q9P2N2 729 aa4.52□□□□□ -1.69
GPHN-216ENST00000557678 KLHL18O94889 574 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 KNG1P01042 644 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 CAPNS1P04632 268 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 COL6A1P12109 1028 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 RBM25P49756 843 aaKnown RBP4.51□□□□□ -1.69
GPHN-216ENST00000557678 SELENOPP49908 381 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 NTRK3Q16288 839 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 BTBD8Q5XKL5 378 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 ZFPM1Q8IX07 1006 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.51□□□□□ -1.69
GPHN-216ENST00000557678 OSBP2Q969R2 916 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 ZNF341Q9BYN7 854 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 CD248Q9HCU0 757 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 SLC39A2Q9NP94 309 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 CATSPERZQ9NTU4 200 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 RIC8BQ9NVN3 520 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 HSPBP1Q9NZL4 362 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 TRAF6Q9Y4K3 522 aa4.51□□□□□ -1.69
GPHN-216ENST00000557678 ESYT3A0FGR9 886 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 KLF4O43474 513 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 STK10O94804 968 aaKnown RBP4.5□□□□□ -1.69
GPHN-216ENST00000557678 CHGBP05060 677 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 KRT15P19012 456 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 HMGA2P52926 109 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 RRADP55042 308 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 USP10Q14694 798 aaKnown RBP4.5□□□□□ -1.69
GPHN-216ENST00000557678 CDSNQ15517 529 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 STYK1Q6J9G0 422 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 CKAP2LQ8IYA6 745 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 ST13P5Q8NFI4 369 aaPredicted RBP4.5□□□□□ -1.69
GPHN-216ENST00000557678 SCAND2PQ9GZW5 306 aaPredicted RBP4.5□□□□□ -1.69
GPHN-216ENST00000557678 PFDN2Q9UHV9 154 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 TELO2Q9Y4R8 837 aa4.5□□□□□ -1.69
GPHN-216ENST00000557678 ASXL2Q76L83 1435 aa4.49□□□□□ -1.69
GPHN-216ENST00000557678 ZNF839A8K0R7 811 aa4.49□□□□□ -1.69
GPHN-216ENST00000557678 FZD7O75084 574 aa4.49□□□□□ -1.69
GPHN-216ENST00000557678 CNOT4O95628 575 aaKnown RBP4.49□□□□□ -1.69
GPHN-216ENST00000557678 ZNF888P0CJ79 500 aaPredicted RBP4.49□□□□□ -1.69
GPHN-216ENST00000557678 SRGAP2CP0DJJ0 459 aa4.49□□□□□ -1.69
GPHN-216ENST00000557678 CSF2RBP32927 897 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms