RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 MAD2L2Q9UI95 211 aa21.26■□□□□ 0.99
ABCD4-228ENST00000557588 KIAA1671Q9BY89 1806 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 TRAF1Q13077 416 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 BMP8AQ7Z5Y6 402 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 EDAQ92838 391 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 KRT23Q9C075 422 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 CNNM2Q9H8M5 875 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 EHMT1Q9H9B1 1298 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 CD207Q9UJ71 328 aa21.25■□□□□ 0.99
ABCD4-228ENST00000557588 TTC3P53804 2025 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 PALM3A6NDB9 673 aaPredicted RBP21.24■□□□□ 0.99
ABCD4-228ENST00000557588 SPATA31C2B4DYI2 1134 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 CHRNA1P02708 482 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 MRPS9P82933 396 aaKnown RBP21.24■□□□□ 0.99
ABCD4-228ENST00000557588 ARHGAP4P98171 946 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 SEMA3FQ13275 785 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 HDAC1Q13547 482 aaPredicted RBP21.24■□□□□ 0.99
ABCD4-228ENST00000557588 SEC23AQ15436 765 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 SLC35G1Q2M3R5 365 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 FCHSD1Q86WN1 690 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 ZNF689Q96CS4 500 aaPredicted RBP21.24■□□□□ 0.99
ABCD4-228ENST00000557588 SNX27Q96L92 541 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 PLVAPQ9BX97 442 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 NRCAMQ92823 1304 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 KMT2EQ8IZD2 1858 aa21.24■□□□□ 0.99
ABCD4-228ENST00000557588 STXBP3O00186 592 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 LINC01565O15544 149 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 FIBPO43427 364 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 GHRP10912 638 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 GTF2F1P35269 517 aaKnown RBP eCLIP21.23■□□□□ 0.99
ABCD4-228ENST00000557588 MGAT3Q09327 533 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 IMMTQ16891 758 aaKnown RBP21.23■□□□□ 0.99
ABCD4-228ENST00000557588 TAF2Q6P1X5 1199 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 CYFIP1Q7L576 1253 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 HOMER1Q86YM7 354 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 PRSS33Q8NF86 280 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 MSLNLQ96KJ4 702 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 DSCC1Q9BVC3 393 aa21.23■□□□□ 0.99
ABCD4-228ENST00000557588 EYA4O95677 639 aa21.22■□□□□ 0.99
ABCD4-228ENST00000557588 CAMK1Q14012 370 aa21.22■□□□□ 0.99
ABCD4-228ENST00000557588 BTG3Q14201 252 aaPredicted RBP21.22■□□□□ 0.99
ABCD4-228ENST00000557588 LPIN1Q14693 890 aa21.22■□□□□ 0.99
ABCD4-228ENST00000557588 P2RX5Q93086 422 aa21.22■□□□□ 0.99
ABCD4-228ENST00000557588 RIOX1Q9H6W3 641 aa21.22■□□□□ 0.99
ABCD4-228ENST00000557588 KAT6AQ92794 2004 aa21.21■□□□□ 0.99
ABCD4-228ENST00000557588 DGKIO75912 1065 aa21.21■□□□□ 0.99
ABCD4-228ENST00000557588 PTPN5P54829 565 aa21.21■□□□□ 0.99
ABCD4-228ENST00000557588 ADAM15Q13444 863 aa21.21■□□□□ 0.99
ABCD4-228ENST00000557588 CWC27Q6UX04 472 aaKnown RBP21.21■□□□□ 0.99
ABCD4-228ENST00000557588 RUFY4Q6ZNE9 571 aa21.21■□□□□ 0.99
ABCD4-228ENST00000557588 PIGSQ96S52 555 aa21.21■□□□□ 0.99
ABCD4-228ENST00000557588 PHOX2BQ99453 314 aa21.21■□□□□ 0.99
ABCD4-228ENST00000557588 TELO2Q9Y4R8 837 aa21.21■□□□□ 0.99
ABCD4-228ENST00000557588 ENPP3O14638 875 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 NDUFV1P49821 464 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 GRM4Q14833 912 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 PKN1Q16512 942 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 UTP14CQ5TAP6 766 aaKnown RBP21.2■□□□□ 0.98
ABCD4-228ENST00000557588 TRIM67Q6ZTA4 783 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 SMRP1Q8NCR6 262 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 PPP2R3CQ969Q6 453 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 PRRX2Q99811 253 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 SENP7Q9BQF6 1050 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 LNPKQ9C0E8 428 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 IGFLR1Q9H665 355 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 ALG13Q9NP73 1137 aaKnown RBP21.2■□□□□ 0.98
ABCD4-228ENST00000557588 DIAPH3Q9NSV4 1193 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 PLAGL2Q9UPG8 496 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 SUPT16HQ9Y5B9 1047 aaKnown RBP21.2■□□□□ 0.98
ABCD4-228ENST00000557588 ZDBF2Q9HCK1 2354 aa21.2■□□□□ 0.98
ABCD4-228ENST00000557588 TMEM221A6NGB7 291 aa21.19■□□□□ 0.98
ABCD4-228ENST00000557588 M0R296 226 aa21.19■□□□□ 0.98
ABCD4-228ENST00000557588 COASYQ13057 564 aa21.19■□□□□ 0.98
ABCD4-228ENST00000557588 NAALADL2Q58DX5 795 aa21.19■□□□□ 0.98
ABCD4-228ENST00000557588 FBXO47Q5MNV8 452 aa21.19■□□□□ 0.98
ABCD4-228ENST00000557588 TSHZ1Q6ZSZ6 1077 aa21.19■□□□□ 0.98
ABCD4-228ENST00000557588 CLEC1BQ9P126 229 aa21.19■□□□□ 0.98
ABCD4-228ENST00000557588 MRPL42Q9Y6G3 142 aaKnown RBP21.19■□□□□ 0.98
ABCD4-228ENST00000557588 BAZ2BQ9UIF8 2168 aaKnown RBP21.19■□□□□ 0.98
ABCD4-228ENST00000557588 PNMA6FA0A0J9YX94 578 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 LOC730098B7Z3J9 87 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 CYTH3O43739 400 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 CSPG5O95196 566 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 DNAJB1P25685 340 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 CBX2Q14781 532 aaPredicted RBP21.18■□□□□ 0.98
ABCD4-228ENST00000557588 RSPH3Q86UC2 560 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 CMTR2Q8IYT2 770 aaKnown RBP21.18■□□□□ 0.98
ABCD4-228ENST00000557588 CRIPAKQ8N1N5 446 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 EFHBQ8N7U6 833 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 LINC01599Q8WXQ3 324 aa21.18■□□□□ 0.98
ABCD4-228ENST00000557588 CFAP54Q96N23 3096 aa21.17■□□□□ 0.98
ABCD4-228ENST00000557588 MBLAC1A4D2B0 266 aaPredicted RBP21.17■□□□□ 0.98
ABCD4-228ENST00000557588 SP4Q02446 784 aa21.17■□□□□ 0.98
ABCD4-228ENST00000557588 PPFIA1Q13136 1202 aa21.17■□□□□ 0.98
ABCD4-228ENST00000557588 IER5LQ5T953 404 aa21.17■□□□□ 0.98
ABCD4-228ENST00000557588 PCNX4Q63HM2 1172 aa21.17■□□□□ 0.98
ABCD4-228ENST00000557588 XRRA1Q6P2D8 792 aa21.17■□□□□ 0.98
ABCD4-228ENST00000557588 CYB5R4Q7L1T6 521 aa21.17■□□□□ 0.98
ABCD4-228ENST00000557588 ADGRD2Q7Z7M1 963 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms