RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 CWF19L1Q69YN2 538 aaKnown RBP11.78□□□□□ -0.52
ABCD4-227ENST00000557554 RTN4RL1Q86UN2 441 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-227ENST00000557554 CCDC105Q8IYK2 499 aa11.78□□□□□ -0.52
ABCD4-227ENST00000557554 CMTR2Q8IYT2 770 aaKnown RBP11.78□□□□□ -0.52
ABCD4-227ENST00000557554 APPBP2Q92624 585 aa11.78□□□□□ -0.52
ABCD4-227ENST00000557554 NEK1Q96PY6 1258 aa11.78□□□□□ -0.52
ABCD4-227ENST00000557554 TUT1Q9H6E5 874 aaKnown RBP11.78□□□□□ -0.52
ABCD4-227ENST00000557554 GPCPD1Q9NPB8 672 aa11.78□□□□□ -0.52
ABCD4-227ENST00000557554 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
ABCD4-227ENST00000557554 USP24Q9UPU5 2620 aa11.78□□□□□ -0.52
ABCD4-227ENST00000557554 M0R2C6 588 aa11.77□□□□□ -0.53
ABCD4-227ENST00000557554 APPP05067 770 aa11.77□□□□□ -0.53
ABCD4-227ENST00000557554 AOC1P19801 751 aa11.77□□□□□ -0.53
ABCD4-227ENST00000557554 ERVFC1P60507 584 aa11.77□□□□□ -0.53
ABCD4-227ENST00000557554 PPARAQ07869 468 aa11.77□□□□□ -0.53
ABCD4-227ENST00000557554 ANKRD54Q6NXT1 300 aa11.77□□□□□ -0.53
ABCD4-227ENST00000557554 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
ABCD4-227ENST00000557554 CDCA3Q99618 268 aaPredicted RBP11.77□□□□□ -0.53
ABCD4-227ENST00000557554 SETD4Q9NVD3 440 aa11.77□□□□□ -0.53
ABCD4-227ENST00000557554 FRMPD2Q68DX3 1309 aaPredicted RBP11.77□□□□□ -0.53
ABCD4-227ENST00000557554 C2CD4DB7Z1M9 353 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
ABCD4-227ENST00000557554 NR3C2P08235 984 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 FGRP09769 529 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
ABCD4-227ENST00000557554 LPIN1Q14693 890 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 KBTBD3Q8NAB2 608 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 DTWD2Q8NBA8 298 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 RASGRP4Q8TDF6 673 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 LINC01599Q8WXQ3 324 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 SPATA33Q96N06 139 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 RMDN3Q96TC7 470 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 TMEM47Q9BQJ4 181 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 BCAS3Q9H6U6 928 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 CDH22Q9UJ99 828 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 NR2E1Q9Y466 385 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 MRVI1Q9Y6F6 885 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 FANCMQ8IYD8 2048 aa11.76□□□□□ -0.53
ABCD4-227ENST00000557554 FSD2A1L4K1 749 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 TSPY2A6NKD2 308 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 FSCN2O14926 492 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 RAB11FIP3O75154 756 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 SNHG28P0DPA3 235 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 PDHBP11177 359 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 UBE3AQ05086 875 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 MGAT3Q09327 533 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 KCNG4Q8TDN1 519 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 PANK1Q8TE04 598 aa11.75□□□□□ -0.53
ABCD4-227ENST00000557554 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
ABCD4-227ENST00000557554 FOXP2O15409 715 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 PPFIA3O75145 1194 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 LGALS2P05162 132 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 ASGR2P07307 311 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
ABCD4-227ENST00000557554 TGFB3P10600 412 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 GHRP10912 638 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 TOP1P11387 765 aaKnown RBP11.74□□□□□ -0.53
ABCD4-227ENST00000557554 HOXB8P17481 243 aaPredicted RBP11.74□□□□□ -0.53
ABCD4-227ENST00000557554 TECP42680 631 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 ZNF543Q08ER8 600 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 ST3GAL2Q16842 350 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 RSPO4Q2I0M5 234 aaPredicted RBP11.74□□□□□ -0.53
ABCD4-227ENST00000557554 USH1GQ495M9 461 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 DCLK2Q8N568 766 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 APOL5Q9BWW9 433 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 MFSD1Q9H3U5 465 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 POMKQ9H5K3 350 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 PXMP2Q9NR77 195 aa11.74□□□□□ -0.53
ABCD4-227ENST00000557554 SORBS3O60504 671 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 GGPS1O95749 300 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 GNAT1P11488 350 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 EIF2AK2P19525 551 aaKnown RBP11.73□□□□□ -0.53
ABCD4-227ENST00000557554 CTDSPL2Q05D32 466 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 FBXO47Q5MNV8 452 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 ARHGEF16Q5VV41 709 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 PDE12Q6L8Q7 609 aaKnown RBP11.73□□□□□ -0.53
ABCD4-227ENST00000557554 KCNV1Q6PIU1 500 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 GPR179Q6PRD1 2367 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 ZDHHC14Q8IZN3 488 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 FLCNQ8NFG4 579 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 CYP2W1Q8TAV3 490 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 SEC62Q99442 399 aaKnown RBP11.73□□□□□ -0.53
ABCD4-227ENST00000557554 USP26Q9BXU7 913 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 NACAP1Q9BZK3 213 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 ADAM7Q9H2U9 754 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 AGO3Q9H9G7 860 aaKnown RBP11.73□□□□□ -0.53
ABCD4-227ENST00000557554 TCP11L1Q9NUJ3 509 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 LIMD1Q9UGP4 676 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 R4GN57 208 aa11.73□□□□□ -0.53
ABCD4-227ENST00000557554 KAT6AQ92794 2004 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 CCER2I3L3R5 266 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 ORC4O43929 436 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 ZFYP08048 801 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-227ENST00000557554 GATMP50440 423 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 COL9A2Q14055 689 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-227ENST00000557554 VSIG10LQ86VR7 867 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 NPAS4Q8IUM7 802 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 SUMF1Q8NBK3 374 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 LMBR1Q8WVP7 490 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms