RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 CRYGNQ8WXF5 182 aa18.05■□□□□ 0.48
TUBB3-214ENST00000557490 UHRF1Q96T88 793 aaPredicted RBP18.05■□□□□ 0.48
TUBB3-214ENST00000557490 C16orf70Q9BSU1 422 aa18.05■□□□□ 0.48
TUBB3-214ENST00000557490 PPP1R12CQ9BZL4 782 aa18.05■□□□□ 0.48
TUBB3-214ENST00000557490 HIPK3Q9H422 1215 aa18.05■□□□□ 0.48
TUBB3-214ENST00000557490 AGO4Q9HCK5 861 aaKnown RBP18.05■□□□□ 0.48
TUBB3-214ENST00000557490 JPH1Q9HDC5 661 aaPredicted RBP18.05■□□□□ 0.48
TUBB3-214ENST00000557490 KCNJ14Q9UNX9 436 aa18.05■□□□□ 0.48
TUBB3-214ENST00000557490 NFASCO94856 1347 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 FAM86B1E9PN63 330 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 HAS3O00219 553 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 ST18O60284 1047 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 DTNBO60941 627 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 FAM86B2P0C5J1 330 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 SETQ01105 290 aaPredicted RBP18.04■□□□□ 0.48
TUBB3-214ENST00000557490 FPGSQ05932 587 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 PTGISQ16647 500 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 UTP14CQ5TAP6 766 aaKnown RBP18.04■□□□□ 0.48
TUBB3-214ENST00000557490 MFSD5Q6N075 450 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 TMEM199Q8N511 208 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 IL27Q8NEV9 243 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 SEPT1Q8WYJ6 367 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 PHF20Q9BVI0 1012 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 SH2B1Q9NRF2 756 aaPredicted RBP18.04■□□□□ 0.48
TUBB3-214ENST00000557490 THEGQ9P2T0 379 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
TUBB3-214ENST00000557490 SCN10AQ9Y5Y9 1956 aa18.04■□□□□ 0.48
TUBB3-214ENST00000557490 H3BRB1 525 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 CYP2C9P11712 490 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 FDPSP14324 419 aaKnown RBP18.03■□□□□ 0.48
TUBB3-214ENST00000557490 CIITAP33076 1130 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 USP11P51784 963 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 KRT25Q7Z3Z0 450 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 CCDC83Q8IWF9 413 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 NOC4LQ9BVI4 516 aaKnown RBP18.03■□□□□ 0.48
TUBB3-214ENST00000557490 TUT1Q9H6E5 874 aaKnown RBP18.03■□□□□ 0.48
TUBB3-214ENST00000557490 HDAC6Q9UBN7 1215 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 SLC9A2Q9UBY0 812 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 GTF2IRD1Q9UHL9 959 aa18.03■□□□□ 0.48
TUBB3-214ENST00000557490 JAK2O60674 1132 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 CYP2C18P33260 490 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 TCF7P36402 384 aaPredicted RBP18.02■□□□□ 0.48
TUBB3-214ENST00000557490 PPIGQ13427 754 aaKnown RBP eCLIP18.02■□□□□ 0.48
TUBB3-214ENST00000557490 TRIM29Q14134 588 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 NPY5RQ15761 445 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 PRR16Q569H4 304 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 GDF6Q6KF10 455 aaPredicted RBP18.02■□□□□ 0.48
TUBB3-214ENST00000557490 TBCKQ8TEA7 893 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 RNPC3Q96LT9 517 aaKnown RBP18.02■□□□□ 0.48
TUBB3-214ENST00000557490 TBC1D32Q96NH3 1257 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.48
TUBB3-214ENST00000557490 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 TELO2Q9Y4R8 837 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 ARIH1Q9Y4X5 557 aaPredicted RBP18.02■□□□□ 0.48
TUBB3-214ENST00000557490 CHD9Q3L8U1 2897 aa18.02■□□□□ 0.48
TUBB3-214ENST00000557490 IGLV3-22A0A075B6J6 115 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 CCDC194A0A1B0GVG4 234 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 GSTTP1A0A1W2PQM5 241 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 M0R2N6 131 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 ST3GAL1Q11201 340 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 ITGB3BPQ13352 177 aaPredicted RBP18.01■□□□□ 0.47
TUBB3-214ENST00000557490 BFSP2Q13515 415 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 NONOQ15233 471 aaKnown RBP eCLIP18.01■□□□□ 0.47
TUBB3-214ENST00000557490 TRIM50Q86XT4 487 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 CCDC155Q8N6L0 562 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 RETREG2Q8NC44 543 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 PPM1EQ8WY54 764 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 ZNF577Q9BSK1 485 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 C1QTNF1Q9BXJ1 281 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 GJB4Q9NTQ9 266 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 MYH7BA7E2Y1 1941 aa18.01■□□□□ 0.47
TUBB3-214ENST00000557490 TCF20Q9UGU0 1960 aaKnown RBP18■□□□□ 0.47
TUBB3-214ENST00000557490 DDX39AO00148 427 aaKnown RBP18■□□□□ 0.47
TUBB3-214ENST00000557490 IPO5O00410 1097 aaKnown RBP18■□□□□ 0.47
TUBB3-214ENST00000557490 DNAJB2P25686 324 aa18■□□□□ 0.47
TUBB3-214ENST00000557490 ACTR2P61160 394 aa18■□□□□ 0.47
TUBB3-214ENST00000557490 GLG1Q92896 1179 aa18■□□□□ 0.47
TUBB3-214ENST00000557490 BACH2Q9BYV9 841 aa18■□□□□ 0.47
TUBB3-214ENST00000557490 SMARCAD1Q9H4L7 1026 aa18■□□□□ 0.47
TUBB3-214ENST00000557490 TBC1D22BQ9NU19 505 aa18■□□□□ 0.47
TUBB3-214ENST00000557490 UMODL1Q5DID0 1318 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 C17orf102A2RUQ5 167 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 SMIM10L2AP0DMW4 78 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 SMIM10L2BP0DMW5 78 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 GNAT1P11488 350 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 CSF2RAP15509 400 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 KRT2P35908 639 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 CCL23P55773 120 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 MRPS5P82675 430 aaKnown RBP17.99■□□□□ 0.47
TUBB3-214ENST00000557490 UIMC1Q96RL1 719 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 ZNF576Q9H609 170 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 AZI2Q9H6S1 392 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 ERAP1Q9NZ08 941 aa17.99■□□□□ 0.47
TUBB3-214ENST00000557490 PITPNM1O00562 1244 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 FOSBP53539 338 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 EPHB4P54760 987 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 HMGN5P82970 282 aaKnown RBP17.98■□□□□ 0.47
TUBB3-214ENST00000557490 PTK7Q13308 1070 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 INF2Q27J81 1249 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms