RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 TEKT3Q9BXF9 490 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 TBX3O15119 743 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 STX6O43752 255 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 RTP1P59025 263 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 RESTQ13127 1097 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 ZNF174Q15697 407 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 TRIM60Q495X7 471 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 ZNF746Q6NUN9 644 aaPredicted RBP16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 SEPT1Q8WYJ6 367 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 PCYT2Q99447 389 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 TMEM60Q9H2L4 133 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 UNC45AQ9H3U1 944 aa16.79■□□□□ 0.28
VIPAS39-210ENST00000557466 EMSYQ7Z589 1322 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 HAS3O00219 553 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 ATG7O95352 703 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 PSEN2P49810 448 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 KRT76Q01546 638 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 ITGA7Q13683 1181 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 MFSD10Q14728 455 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 CALCRLQ16602 461 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 C1orf53Q5VUE5 145 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 BRAPQ7Z569 592 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 SLC43A3Q8NBI5 491 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 FAM20AQ96MK3 541 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 TCEAL9Q9UHQ7 104 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 VAV3Q9UKW4 847 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
VIPAS39-210ENST00000557466 ARVCFO00192 962 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 CHMP2AO43633 222 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 LGR5O75473 907 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 SUPT20HL2P0C7V6 817 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 CDK7P50613 346 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 CHMP4BP1P59074 171 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 NBPF20Q3BBV1 942 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 RILPL1Q5EBL4 403 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 B3GNT9Q6UX72 402 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 ABHD15Q6UXT9 468 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 CCDC60Q8IWA6 550 aaPredicted RBP16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 KATNAL1Q9BW62 490 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 ATP11BQ9Y2G3 1177 aa16.77■□□□□ 0.28
VIPAS39-210ENST00000557466 LTBP2Q14767 1821 aa16.77■□□□□ 0.27
VIPAS39-210ENST00000557466 TRIP12Q14669 1992 aaPredicted RBP16.77■□□□□ 0.27
VIPAS39-210ENST00000557466 IGKV6D-21A0A0A0MT36 114 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 H3BRB1 525 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 MARCH6O60337 910 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 MLLT1Q03111 559 aaPredicted RBP16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 PPP2R5CQ13362 524 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 KIAA0753Q2KHM9 967 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 FAM47CQ5HY64 1035 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 MIS18BP1Q6P0N0 1132 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 SMAP1Q8IYB5 467 aaPredicted RBP16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 SLFN12Q8IYM2 578 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 MTMR9Q96QG7 549 aa16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 TUT1Q9H6E5 874 aaKnown RBP16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 ZNF215Q9UL58 517 aaPredicted RBP16.76■□□□□ 0.27
VIPAS39-210ENST00000557466 KAT6AQ92794 2004 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 WDR64B1ANS9 1081 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 PQBP1O60828 265 aaKnown RBP16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 BAG4O95429 457 aaKnown RBP16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 OR52Z1P0C646 297 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 MARK3P27448 753 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 JAK3P52333 1124 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 TLE2Q04725 743 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 SPIRE1Q08AE8 756 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 PKP1Q13835 747 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 NFRKBQ6P4R8 1299 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 MIER3Q7Z3K6 550 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 FAM126BQ8IXS8 530 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 C7orf61Q8IZ16 206 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 C4orf32Q8N8J7 132 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 GLG1Q92896 1179 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 SMARCAD1Q9H4L7 1026 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 DISC1Q9NRI5 854 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 SAMM50Q9Y512 469 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 PCDHA10Q9Y5I2 948 aa16.75■□□□□ 0.27
VIPAS39-210ENST00000557466 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 IGSF9BQ9UPX0 1349 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 PDE4DIPQ5VU43 2346 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 EML1O00423 815 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 BACH1O14867 736 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 PSAPP07602 524 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 SFNP31947 248 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 TXKP42681 527 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 FOXD4L5Q5VV16 416 aaPredicted RBP16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 FAM173BQ6P4H8 233 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 ANKRD33Q7Z3H0 272 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 SESTD1Q86VW0 696 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 AFAP1L1Q8TED9 768 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 FOXD4L4Q8WXT5 416 aaPredicted RBP16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 DPF3Q92784 378 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 AZI2Q9H6S1 392 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 ZNF302Q9NR11 478 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 ERAP1Q9NZ08 941 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 HDAC6Q9UBN7 1215 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 ARID2Q68CP9 1835 aa16.74■□□□□ 0.27
VIPAS39-210ENST00000557466 TANC1Q9C0D5 1861 aa16.73■□□□□ 0.27
VIPAS39-210ENST00000557466 EVI5O60447 810 aa16.73■□□□□ 0.27
VIPAS39-210ENST00000557466 B4GALT4O60513 344 aa16.73■□□□□ 0.27
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