RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 RPS6P62753 249 aaKnown RBP11.15□□□□□ -0.62
NEDD1-211ENST00000557454 PLPP4Q5VZY2 271 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 RNF207Q6ZRF8 634 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 ARPP21Q9UBL0 812 aaPredicted RBP11.15□□□□□ -0.62
NEDD1-211ENST00000557454 DUSP12Q9UNI6 340 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 MYH4Q9Y623 1939 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 CNOT1A5YKK6 2376 aaKnown RBP11.14□□□□□ -0.63
NEDD1-211ENST00000557454 KIAA1671Q9BY89 1806 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 ENPP3O14638 875 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 FSCN2O14926 492 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 PLA2G6O60733 806 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 CHGBP05060 677 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 DCNP07585 359 aaKnown RBP11.14□□□□□ -0.63
NEDD1-211ENST00000557454 RFX1P22670 979 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 TBC1D8BQ0IIM8 1120 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 CES5AQ6NT32 575 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 DNERQ8NFT8 737 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 PPTC7Q8NI37 304 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 CLEC4DQ8WXI8 215 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
NEDD1-211ENST00000557454 ADAM7Q9H2U9 754 aa11.14□□□□□ -0.63
NEDD1-211ENST00000557454 FANCMQ8IYD8 2048 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 KRBA1A5PL33 1030 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 POTEMA6NI47 508 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 PROS1P07225 676 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 TGM1P22735 817 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 PMLP29590 882 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 HOXC8P31273 242 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 GATMP50440 423 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 UBE3AQ05086 875 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 APOBRQ0VD83 1088 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 TDGQ13569 410 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 TPRNQ4KMQ1 711 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 POTEGQ6S5H5 508 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 C1orf210Q8IVY1 113 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 RASGRP4Q8TDF6 673 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 LINC01599Q8WXQ3 324 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
NEDD1-211ENST00000557454 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
NEDD1-211ENST00000557454 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
NEDD1-211ENST00000557454 SMG5Q9UPR3 1016 aaKnown RBP11.13□□□□□ -0.63
NEDD1-211ENST00000557454 SLC30A4O14863 429 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 SPTLC1O15269 473 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 NARSO43776 548 aaKnown RBP11.12□□□□□ -0.63
NEDD1-211ENST00000557454 SORBS3O60504 671 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 SMIM10L2AP0DMW4 78 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 SMIM10L2BP0DMW5 78 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 HOXD8P13378 290 aaPredicted RBP11.12□□□□□ -0.63
NEDD1-211ENST00000557454 ADD2P35612 726 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 MTHFRP42898 656 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 ITIH3Q06033 890 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 AACSQ86V21 672 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 CASP10Q92851 521 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 SECISBP2LQ93073 1101 aaKnown RBP11.12□□□□□ -0.63
NEDD1-211ENST00000557454 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
NEDD1-211ENST00000557454 TBC1D17Q9HA65 648 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 CYP26B1Q9NR63 512 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 DDX41Q9UJV9 622 aaKnown RBP11.12□□□□□ -0.63
NEDD1-211ENST00000557454 ZMIZ1Q9ULJ6 1067 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
NEDD1-211ENST00000557454 PLXNA4Q9HCM2 1894 aa11.12□□□□□ -0.63
NEDD1-211ENST00000557454 TTC3P53804 2025 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 HIDE1A8MVS5 230 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 MINDY4BA8MYZ0 360 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 B4DLN1 442 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 BCAR3O75815 825 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 FGF18O76093 207 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 EOMESO95936 686 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 CHRNA1P02708 482 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 CFHP08603 1231 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 SLC16A2P36021 539 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 MRPL12P52815 198 aaKnown RBP11.11□□□□□ -0.63
NEDD1-211ENST00000557454 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 LPIN1Q14693 890 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 FAM26DQ5JW98 314 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 RCSD1Q6JBY9 416 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 NPAS4Q8IUM7 802 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 MAML2Q8IZL2 1156 aaPredicted RBP11.11□□□□□ -0.63
NEDD1-211ENST00000557454 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
NEDD1-211ENST00000557454 SSH3Q8TE77 659 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 C16orf70Q9BSU1 422 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 DLGAP2Q9P1A6 1054 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 DBR1Q9UK59 544 aaKnown RBP11.11□□□□□ -0.63
NEDD1-211ENST00000557454 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 PCDHB12Q9Y5F1 795 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 PLIN4Q96Q06 1357 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 CACNA1IQ9P0X4 2223 aa11.11□□□□□ -0.63
NEDD1-211ENST00000557454 WDFY3Q8IZQ1 3526 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 PYGBP11216 843 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 SHC2P98077 582 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 CCDC96Q2M329 555 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 SBK1Q52WX2 424 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 RARS2Q5T160 578 aaKnown RBP11.1□□□□□ -0.63
NEDD1-211ENST00000557454 SPOUT1Q5T280 376 aaKnown RBP11.1□□□□□ -0.63
NEDD1-211ENST00000557454 TTBK2Q6IQ55 1244 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 PDE12Q6L8Q7 609 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms