RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 KLK7P49862 253 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 KIF11P52732 1056 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 PMS1P54277 932 aaKnown RBP11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 ROR2Q01974 943 aaKnown RBP11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 FKBP4Q02790 459 aaKnown RBP eCLIP11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 SNX1Q13596 522 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 TBC1D25Q3MII6 688 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 MEX3CQ5U5Q3 659 aaKnown RBP11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 CATIPQ7Z7H3 387 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 CRACR2BQ8N4Y2 399 aaPredicted RBP11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 LRRC45Q96CN5 670 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 YIPF2Q9BWQ6 316 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 FAM129AQ9BZQ8 928 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 YIPF3Q9GZM5 350 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 ZFATQ9P243 1243 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 SALL4Q9UJQ4 1053 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 N6AMT1Q9Y5N5 214 aa11.46□□□□□ -0.57
SUPT16H-207ENST00000557394 SPATA31A1Q5TZJ5 1347 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 EYA2O00167 538 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 DIAPH2O60879 1101 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 PLEKP08567 350 aaPredicted RBP11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 CLTAP09496 248 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 GCLCP48506 637 aaPredicted RBP11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 TRADDQ15628 312 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 TTI2Q6NXR4 508 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 TEX9Q8N6V9 391 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 ZFAND2BQ8WV99 257 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 INPP4AQ96PE3 977 aaPredicted RBP11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 XPO6Q96QU8 1125 aaKnown RBP11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 TUBGCP2Q9BSJ2 902 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 TMEM59LQ9UK28 342 aa11.46□□□□□ -0.58
SUPT16H-207ENST00000557394 AFF2P51816 1311 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 BACH1O14867 736 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 NQO1P15559 274 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 PAPOLAP51003 745 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 RASSF7Q02833 373 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 CUL1Q13616 776 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 IFI16Q16666 785 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 PTPROQ16827 1216 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 PNMA8AQ86V59 439 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 APLFQ8IW19 511 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 ZSCAN29Q8IWY8 852 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 ANKS4BQ8N8V4 417 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 OR2W6PQ8NHA6 318 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 SHISA4Q96DD7 197 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 MTMR8Q96EF0 704 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 ZNF512BQ96KM6 892 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 SPACA7Q96KW9 195 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 KRT12Q99456 494 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 SFMBT1Q9UHJ3 866 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 MYH10P35580 1976 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 MYH7P12883 1935 aa11.45□□□□□ -0.58
SUPT16H-207ENST00000557394 RAD51CO43502 376 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 MYL6BP14649 208 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 FOSL1P15407 271 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 ZNF132P52740 706 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 ATP2C1P98194 919 aaPredicted RBP11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 MTMR3Q13615 1198 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 VPS72Q15906 364 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 RTN1Q16799 776 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 KIAA0753Q2KHM9 967 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 LRRC24Q50LG9 513 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 TBC1D1Q86TI0 1168 aaPredicted RBP11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 FBXO41Q8TF61 875 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 NOX5Q96PH1 765 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 IP6K2Q9UHH9 426 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 NOVA2Q9UNW9 492 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 PCDH11XQ9BZA7 1347 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 PCDH11YQ9BZA8 1340 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 WNT7AO00755 349 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 ABLIM1O14639 778 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 LDHCP07864 332 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 PHKG2P15735 406 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 ATP4AP20648 1035 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 CDC25CP30307 473 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 CTNNA1P35221 906 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 EIF4A3P38919 411 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 RCAN1P53805 252 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 ERVK-9P63128 1117 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 ASTE1Q2TB18 679 aaPredicted RBP11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 EARS2Q5JPH6 523 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 CACNA2D4Q7Z3S7 1137 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 IFNL2Q8IZJ0 200 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 LPIN2Q92539 896 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 MAPK8IP1Q9UQF2 711 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 SCINQ9Y6U3 715 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
SUPT16H-207ENST00000557394 STXBP3O00186 592 aa11.43□□□□□ -0.58
SUPT16H-207ENST00000557394 ALDH1B1P30837 517 aa11.43□□□□□ -0.58
SUPT16H-207ENST00000557394 MAGEA1P43355 309 aa11.43□□□□□ -0.58
SUPT16H-207ENST00000557394 TBX4P57082 545 aa11.43□□□□□ -0.58
SUPT16H-207ENST00000557394 MAGOHP61326 146 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-207ENST00000557394 TNNC1P63316 161 aa11.43□□□□□ -0.58
SUPT16H-207ENST00000557394 SEPT2Q15019 361 aa11.43□□□□□ -0.58
SUPT16H-207ENST00000557394 ALX1Q15699 326 aa11.43□□□□□ -0.58
SUPT16H-207ENST00000557394 ODF2Q5BJF6 829 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms