RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 UTP4Q969X6 686 aaKnown RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 TCF12Q99081 682 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 WDR18Q9BV38 432 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 KCNF1Q9H3M0 494 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 PRKRIP1Q9H875 184 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 TXNRD2Q9NNW7 524 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 DDX4Q9NQI0 724 aaKnown RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 RAD18Q9NS91 495 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 TMOD4Q9NZQ9 345 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 RBPJLQ9UBG7 517 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 GPN3Q9UHW5 284 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 AKAP2Q9Y2D5 859 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 OTOFQ9HC10 1997 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 GPR75-ASB3A0A0A6YYF3 556 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 TMEM238LA0A1B0GVL6 79 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 TREHO43280 583 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 EIF4EBP3O60516 100 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-247ENST00000557311 LDHCP07864 332 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 BTDP43251 543 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 ERVK-24P63145 666 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 GRM2Q14416 872 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 CCL14Q16627 93 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 SLC39A5Q6ZMH5 540 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 DZIP1Q86YF9 867 aaKnown RBP5.96□□□□□ -1.46
ATXN3-247ENST00000557311 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.46
ATXN3-247ENST00000557311 BADQ92934 168 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 ASB16Q96NS5 453 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 APBA2Q99767 749 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 CORO1BQ9BR76 489 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 CWC22Q9HCG8 908 aaKnown RBP5.96□□□□□ -1.46
ATXN3-247ENST00000557311 GINM1Q9NU53 330 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 ABCF2Q9UG63 623 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 DDX20Q9UHI6 824 aaKnown RBP5.96□□□□□ -1.46
ATXN3-247ENST00000557311 HERC5Q9UII4 1024 aaKnown RBP5.96□□□□□ -1.46
ATXN3-247ENST00000557311 ATP11BQ9Y2G3 1177 aa5.96□□□□□ -1.46
ATXN3-247ENST00000557311 COL2A1P02458 1487 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-247ENST00000557311 ECM29Q5VYK3 1845 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-247ENST00000557311 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-247ENST00000557311 SLC15A5A6NIM6 579 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 PEX10O60683 326 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 CYP11A1P05108 521 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 ASNSP08243 561 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 CNGA1P29973 690 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 RFX5P48382 616 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-247ENST00000557311 RHBDL3P58872 404 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 CCNA1P78396 465 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 RRP1BQ14684 758 aaKnown RBP5.95□□□□□ -1.46
ATXN3-247ENST00000557311 POU4F3Q15319 338 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 KIAA1211Q6ZU35 1233 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 SND1Q7KZF4 910 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-247ENST00000557311 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 FOXP4Q8IVH2 680 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-247ENST00000557311 BCO2Q9BYV7 579 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 USP44Q9H0E7 712 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 GZF1Q9H116 711 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-247ENST00000557311 PORCNQ9H237 461 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 CYP4F12Q9HCS2 524 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 PRDM5Q9NQX1 630 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-247ENST00000557311 PI4KBQ9UBF8 816 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 RAPGEFL1Q9UHV5 662 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 RABGAP1Q9Y3P9 1069 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 TACC3Q9Y6A5 838 aa5.95□□□□□ -1.46
ATXN3-247ENST00000557311 ARAP2Q8WZ64 1704 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 DHX15O43143 795 aaKnown RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 RRP9O43818 475 aaKnown RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 IGSF3O75054 1194 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 CIAO1O76071 339 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 HOXC6P09630 235 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 MAOBP27338 520 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 IL15P40933 162 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 PHKA1P46020 1223 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 USP11P51784 963 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 GSTO1P78417 241 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 MRPS5P82675 430 aaKnown RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 ENOX2Q16206 610 aaKnown RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 ZNF423Q2M1K9 1284 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 HP1BP3Q5SSJ5 553 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 GJC2Q5T442 439 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 ANKRD34AQ69YU3 496 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 ALG1LQ6GMV1 187 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 NXPE4Q6UWF7 544 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 USP38Q8NB14 1042 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 RNPC3Q96LT9 517 aaKnown RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 ASB2Q96Q27 587 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 PAGR1Q9BTK6 254 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 DHX36Q9H2U1 1008 aaKnown RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 CHMP4BQ9H444 224 aaKnown RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 ZNF576Q9H609 170 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 SOX17Q9H6I2 414 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-247ENST00000557311 ZFYVE1Q9HBF4 777 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 FLRT1Q9NZU1 646 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 STOML1Q9UBI4 398 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 MROH7-TTC4A0A0A0MT08 1334 aa5.94□□□□□ -1.46
ATXN3-247ENST00000557311 PDS5AQ29RF7 1337 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms