RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CALML3P27482 149 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 RABGGTBP53611 331 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 CCDC62Q6P9F0 684 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 TREML4Q6UXN2 200 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 SLC30A10Q6XR72 485 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 RASGRP2Q7LDG7 609 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 CCDC155Q8N6L0 562 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 CAGE1Q8TC20 777 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 ANKS1AQ92625 1134 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 ESR2Q92731 530 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 CHMP4CQ96CF2 233 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 ITPKCQ96DU7 683 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 IWS1Q96ST2 819 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 UHRF1Q96T88 793 aaPredicted RBP10.14□□□□□ -0.79
VRK1-206ENST00000557222 OCSTAMPQ9BR26 566 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 COG5Q9UP83 839 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 MTMR7Q9Y216 660 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 DDX49Q9Y6V7 483 aaKnown RBP10.14□□□□□ -0.79
VRK1-206ENST00000557222 FRMPD2Q68DX3 1309 aaPredicted RBP10.13□□□□□ -0.79
VRK1-206ENST00000557222 CCDC171Q6TFL3 1326 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 A0A0D9SFI3 127 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 PTK2Q05397 1052 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 RBL2Q08999 1139 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 CCDC85BQ15834 202 aaPredicted RBP10.13□□□□□ -0.79
VRK1-206ENST00000557222 RRP12Q5JTH9 1297 aaKnown RBP10.13□□□□□ -0.79
VRK1-206ENST00000557222 MRPL14Q6P1L8 145 aaKnown RBP10.13□□□□□ -0.79
VRK1-206ENST00000557222 MCF2L2Q86YR7 1114 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 AFAP1L1Q8TED9 768 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 FAM227BQ96M60 508 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 ZFP42Q96MM3 310 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 LMCD1Q9NZU5 365 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 GBF1Q92538 1859 aa10.13□□□□□ -0.79
VRK1-206ENST00000557222 ABCB11O95342 1321 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 EFCAB14O75071 495 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 GH1P01241 217 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 MYOGP15173 224 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 CASTP20810 708 aaKnown RBP10.12□□□□□ -0.79
VRK1-206ENST00000557222 STXBP2Q15833 593 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 FAM47CQ5HY64 1035 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 LCE2AQ5TA79 106 aaPredicted RBP10.12□□□□□ -0.79
VRK1-206ENST00000557222 DEFB128Q7Z7B8 93 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 ZBTB33Q86T24 672 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 IQCA1Q86XH1 822 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 HERC6Q8IVU3 1022 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 SAMD3Q8N6K7 520 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 NSUN6Q8TEA1 469 aaKnown RBP10.12□□□□□ -0.79
VRK1-206ENST00000557222 MAP3K20Q9NYL2 800 aaKnown RBP10.12□□□□□ -0.79
VRK1-206ENST00000557222 NOD1Q9Y239 953 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 MTCH2Q9Y6C9 303 aa10.12□□□□□ -0.79
VRK1-206ENST00000557222 ZNF213O14771 459 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 EIF3JO75822 258 aaKnown RBP10.11□□□□□ -0.79
VRK1-206ENST00000557222 CA3P07451 260 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 RRP1P56182 461 aaKnown RBP10.11□□□□□ -0.79
VRK1-206ENST00000557222 GHRHRQ02643 423 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 TAP1Q03518 808 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 NMIQ13287 307 aaPredicted RBP10.11□□□□□ -0.79
VRK1-206ENST00000557222 PTGISQ16647 500 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 DGKDQ16760 1214 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 ASPRV1Q53RT3 343 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 ZNF589Q86UQ0 364 aaPredicted RBP10.11□□□□□ -0.79
VRK1-206ENST00000557222 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 SYTL5Q8TDW5 730 aaPredicted RBP10.11□□□□□ -0.79
VRK1-206ENST00000557222 COPS5Q92905 334 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 KATNAL1Q9BW62 490 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 C1QTNF1Q9BXJ1 281 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 FTOQ9C0B1 505 aaKnown RBP eCLIP10.11□□□□□ -0.79
VRK1-206ENST00000557222 OSBPL3Q9H4L5 887 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 MRPL11Q9Y3B7 192 aaKnown RBP10.11□□□□□ -0.79
VRK1-206ENST00000557222 BRWD1Q9NSI6 2320 aa10.11□□□□□ -0.79
VRK1-206ENST00000557222 TET1Q8NFU7 2136 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 ABHD14A-ACY1A0A1B0GW23 586 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 HIP1O00291 1037 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 ARIH2O95376 493 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 CXCL10P02778 98 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 MMP3P08254 477 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 SELPP16109 830 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 SDSP20132 328 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 KCNJ6P48051 423 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 HAND2P61296 217 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 ARHGAP1Q07960 439 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 LAMC2Q13753 1193 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 CDC37Q16543 378 aaPredicted RBP10.1□□□□□ -0.79
VRK1-206ENST00000557222 KCNV1Q6PIU1 500 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 TBC1D10CQ8IV04 446 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 AFG1LQ8WV93 481 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 RMDN3Q96TC7 470 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 UBA5Q9GZZ9 404 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 KAT14Q9H8E8 782 aa10.1□□□□□ -0.79
VRK1-206ENST00000557222 SCN5AQ14524 2016 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 TRIP12Q14669 1992 aaPredicted RBP10.09□□□□□ -0.79
VRK1-206ENST00000557222 PPFIA4O75335 1185 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 HOXD8P13378 290 aaPredicted RBP10.09□□□□□ -0.79
VRK1-206ENST00000557222 NFX1Q12986 1120 aaKnown RBP10.09□□□□□ -0.79
VRK1-206ENST00000557222 TRAF1Q13077 416 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 USH1GQ495M9 461 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 GDF6Q6KF10 455 aaPredicted RBP10.09□□□□□ -0.79
VRK1-206ENST00000557222 CNKSR3Q6P9H4 555 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 FBXO11Q86XK2 927 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms