RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 GIMAP8Q8ND71 665 aaPredicted RBP16.6■□□□□ 0.25
VRTN-202ENST00000557177 APBB2Q92870 758 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 GPRASP2Q96D09 838 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 MRPL38Q96DV4 380 aaKnown RBP16.6■□□□□ 0.25
VRTN-202ENST00000557177 SAMD11Q96NU1 681 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 EPHX3Q9H6B9 360 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 NRCAMQ92823 1304 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 ATP9AO75110 1047 aa16.59■□□□□ 0.25
VRTN-202ENST00000557177 GNAQP50148 359 aa16.59■□□□□ 0.25
VRTN-202ENST00000557177 SP4Q02446 784 aa16.59■□□□□ 0.25
VRTN-202ENST00000557177 LEXMQ3ZCV2 418 aa16.59■□□□□ 0.25
VRTN-202ENST00000557177 KHSRPQ92945 711 aaKnown RBP eCLIP16.59■□□□□ 0.25
VRTN-202ENST00000557177 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
VRTN-202ENST00000557177 YME1L1Q96TA2 773 aa16.59■□□□□ 0.25
VRTN-202ENST00000557177 IFIH1Q9BYX4 1025 aaKnown RBP16.59■□□□□ 0.25
VRTN-202ENST00000557177 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.25
VRTN-202ENST00000557177 H3BNC9 293 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 UPP2O95045 317 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 CHRNA1P02708 482 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 ITGB5P18084 799 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 MCM5P33992 734 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 TCF7P36402 384 aaPredicted RBP16.58■□□□□ 0.24
VRTN-202ENST00000557177 LIFRP42702 1097 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 RUFY4Q6ZNE9 571 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 CMTR1Q8N1G2 835 aaKnown RBP16.58■□□□□ 0.24
VRTN-202ENST00000557177 TMTC2Q8N394 836 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.58■□□□□ 0.24
VRTN-202ENST00000557177 CDHR1Q96JP9 859 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 LSG1Q9H089 658 aaKnown RBP16.58■□□□□ 0.24
VRTN-202ENST00000557177 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 EHMT1Q9H9B1 1298 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 CD320Q9NPF0 282 aa16.58■□□□□ 0.24
VRTN-202ENST00000557177 GSTTP1A0A1W2PQM5 241 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 CALM1P0DP23 149 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 CALM2P0DP24 149 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 CALM3P0DP25 149 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 KCNA5P22460 613 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 PLA2G5P39877 138 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 MGAT3Q09327 533 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 PTPROQ16827 1216 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 TAF2Q6P1X5 1199 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 NFXL1Q6ZNB6 911 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 TMEM192Q8IY95 271 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 LRFN3Q9BTN0 628 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 UBIAD1Q9Y5Z9 338 aa16.57■□□□□ 0.24
VRTN-202ENST00000557177 MBLAC1A4D2B0 266 aaPredicted RBP16.56■□□□□ 0.24
VRTN-202ENST00000557177 CCDC69A6NI79 296 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 LINC00271P0C7V0 271 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 RXRAP19793 462 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 PPFIA1Q13136 1202 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 GPM6BQ13491 265 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 COL19A1Q14993 1142 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 UBE2SQ16763 222 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 TIGD5Q53EQ6 642 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 MARCH8Q5T0T0 291 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 SEPT1Q8WYJ6 367 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 RC3H2Q9HBD1 1191 aaKnown RBP16.56■□□□□ 0.24
VRTN-202ENST00000557177 C11orf16Q9NQ32 467 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 ERAP1Q9NZ08 941 aa16.56■□□□□ 0.24
VRTN-202ENST00000557177 SLC27A2O14975 620 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 GHRP10912 638 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 MTMR1Q13613 665 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 LPIN1Q14693 890 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 GRIK4Q16099 956 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 TMTC3Q6ZXV5 915 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 FAM178BQ8IXR5 827 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 BANK1Q8NDB2 785 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 TUBE1Q9UJT0 475 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 C5orf42Q9H799 3197 aa16.55■□□□□ 0.24
VRTN-202ENST00000557177 TTC3P53804 2025 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 hCG_1642624A0A1W2PR95 340 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 C5orf67F2Z3F1 127 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 PI4K2BG5E9Z4 385 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 MAFGO15525 162 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 GPR37L1O60883 481 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 IL9P15248 144 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 MARK3P27448 753 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 NECTIN1Q15223 517 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 TMEM31Q5JXX7 168 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 PTCRAQ6ISU1 281 aaPredicted RBP16.54■□□□□ 0.24
VRTN-202ENST00000557177 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 RAB11FIP4Q86YS3 637 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 FANCBQ8NB91 859 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 IL17RAQ96F46 866 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 ESYT1Q9BSJ8 1104 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 SMARCAD1Q9H4L7 1026 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 JADE2Q9NQC1 790 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 PCDHA6Q9UN73 950 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 PCDHA8Q9Y5H6 950 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 SLC12A7Q9Y666 1083 aa16.54■□□□□ 0.24
VRTN-202ENST00000557177 ADGRA3Q8IWK6 1321 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 GRXCR2A6NFK2 248 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 SPDYE3A6NKU9 549 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 IRX6P78412 446 aaPredicted RBP16.53■□□□□ 0.24
VRTN-202ENST00000557177 PUS10Q3MIT2 529 aaKnown RBP16.53■□□□□ 0.24
VRTN-202ENST00000557177 TCEAL5Q5H9L2 206 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 FBXO47Q5MNV8 452 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 RSPH3Q86UC2 560 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms