RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 GRM4Q14833 912 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 RTN1Q16799 776 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 TBCELQ5QJ74 424 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 SH3PXD2AQ5TCZ1 1133 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 TMEM164Q5U3C3 297 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 SLFN13Q68D06 897 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 LRRC69Q6ZNQ3 347 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 KCTD1Q719H9 257 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 CATIPQ7Z7H3 387 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 ERO1BQ86YB8 467 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 SPICE1Q8N0Z3 855 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 SRBD1Q8N5C6 995 aaKnown RBP6.16□□□□□ -1.42
ATXN3-244ENST00000556898 NSUN7Q8NE18 718 aaKnown RBP6.16□□□□□ -1.42
ATXN3-244ENST00000556898 RAET1EQ8TD07 263 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 MKL1Q969V6 931 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 ZSCAN31Q96LW9 406 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-244ENST00000556898 AIFM3Q96NN9 605 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 SLC30A3Q99726 388 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 UBA5Q9GZZ9 404 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 RNF208Q9H0X6 261 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 KANSL2Q9H9L4 492 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 TPSG1Q9NRR2 321 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 GJB4Q9NTQ9 266 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 NYAP2Q9P242 653 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 BIN2Q9UBW5 565 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-244ENST00000556898 MAD2L2Q9UI95 211 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 ZHX2Q9Y6X8 837 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
ATXN3-244ENST00000556898 PTPDC1A2A3K4 754 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 TRIM75PA6NK02 468 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 F5H6K3 240 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SOX1O00570 391 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-244ENST00000556898 DDAH1O94760 285 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SGPL1O95470 568 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 PDHBP11177 359 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 GJB2P29033 226 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SLC16A2P36021 539 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 KLRC3Q07444 240 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SPP2Q13103 211 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 LAMC2Q13753 1193 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 PKP1Q13835 747 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 TEAD4Q15561 434 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 NTRK3Q16288 839 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 CCDC96Q2M329 555 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 NOL9Q5SY16 702 aaKnown RBP6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SYNE3Q6ZMZ3 975 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 TMTC3Q6ZXV5 915 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SLC9A9Q8IVB4 645 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 FANCBQ8NB91 859 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SMARCC2Q8TAQ2 1214 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 U2AF1L4Q8WU68 220 aaKnown RBP6.15□□□□□ -1.42
ATXN3-244ENST00000556898 FOXD4L4Q8WXT5 416 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-244ENST00000556898 MTA3Q9BTC8 594 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 VAT1LQ9HCJ6 419 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 SH2B1Q9NRF2 756 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-244ENST00000556898 ISY1Q9ULR0 285 aaKnown RBP6.15□□□□□ -1.42
ATXN3-244ENST00000556898 USTQ9Y2C2 406 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 STXBP5LQ9Y2K9 1186 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 TMX2Q9Y320 296 aa6.15□□□□□ -1.42
ATXN3-244ENST00000556898 EML1O00423 815 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 ADAMTS3O15072 1205 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 CYTH3O43739 400 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 PEX10O60683 326 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 FARP2O94887 1054 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-244ENST00000556898 ASNSP08243 561 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 PARP1P09874 1014 aaKnown RBP6.14□□□□□ -1.43
ATXN3-244ENST00000556898 SNHG28P0DPA3 235 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 WEE1P30291 646 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 BMP8BP34820 402 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 NOS2P35228 1153 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 GUCY1B3Q02153 619 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 ZNF543Q08ER8 600 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 PPIL2Q13356 520 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 CCDC178Q5BJE1 867 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 FAM83BQ5T0W9 1011 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 TMTC2Q8N394 836 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 DEFB123Q8N688 67 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 CTCFLQ8NI51 663 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-244ENST00000556898 CLP1Q92989 425 aaKnown RBP6.14□□□□□ -1.43
ATXN3-244ENST00000556898 HOOK2Q96ED9 719 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 CHAMP1Q96JM3 812 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 PIGSQ96S52 555 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 FEZ1Q99689 392 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 SLC26A6Q9BXS9 759 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 TSPAN10Q9H1Z9 355 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-244ENST00000556898 VCPKMTQ9H867 229 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 PICK1Q9NRD5 415 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 FBXO28Q9NVF7 368 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 CPA4Q9UI42 421 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 SMC3Q9UQE7 1217 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 AFG3L2Q9Y4W6 797 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 MYH8P13535 1937 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 OTOFQ9HC10 1997 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 NID2Q14112 1375 aa6.14□□□□□ -1.43
ATXN3-244ENST00000556898 ATAD5Q96QE3 1844 aa6.13□□□□□ -1.43
ATXN3-244ENST00000556898 DOCK1Q14185 1865 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms