RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 SMC3Q9UQE7 1217 aa27.86■■■□□ 2.05
SDR39U1-221ENST00000556707 TRIM43BA6NCK2 446 aa27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 KIAA0355O15063 1070 aa27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 MSH4O15457 936 aa27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 GCFC2P16383 781 aaKnown RBP27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 ACTR2P61160 394 aa27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 UTP14CQ5TAP6 766 aaKnown RBP27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 PPP4R3AQ6IN85 833 aa27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 SESTD1Q86VW0 696 aa27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 TRIM43Q96BQ3 446 aaPredicted RBP27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 NAP1L4Q99733 375 aaKnown RBP27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 TRPV6Q9H1D0 765 aa27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 TBX21Q9UL17 535 aa27.85■■■□□ 2.05
SDR39U1-221ENST00000556707 DDX39AO00148 427 aaKnown RBP27.84■■■□□ 2.05
SDR39U1-221ENST00000556707 B4GALT4O60513 344 aa27.84■■■□□ 2.05
SDR39U1-221ENST00000556707 TRIM50Q86XT4 487 aa27.84■■■□□ 2.05
SDR39U1-221ENST00000556707 SNX21Q969T3 373 aa27.84■■■□□ 2.05
SDR39U1-221ENST00000556707 FOXP1Q9H334 677 aaPredicted RBP27.84■■■□□ 2.05
SDR39U1-221ENST00000556707 DDX25Q9UHL0 483 aaKnown RBP27.84■■■□□ 2.05
SDR39U1-221ENST00000556707 ZNF215Q9UL58 517 aaPredicted RBP27.84■■■□□ 2.05
SDR39U1-221ENST00000556707 CCNE2O96020 404 aa27.83■■■□□ 2.05
SDR39U1-221ENST00000556707 SLC5A5Q92911 643 aa27.83■■■□□ 2.05
SDR39U1-221ENST00000556707 TRMT13Q9NUP7 481 aaKnown RBP27.83■■■□□ 2.05
SDR39U1-221ENST00000556707 HDAC6Q9UBN7 1215 aa27.83■■■□□ 2.05
SDR39U1-221ENST00000556707 K7ELQ4 463 aaPredicted RBP27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 SLC37A4O43826 429 aa27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 CCNT1O60563 726 aaKnown RBP27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 LGR5O75473 907 aa27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 ATG7O95352 703 aa27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 SUPT20HL2P0C7V6 817 aa27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 C7orf31Q8N865 590 aa27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 RIT2Q99578 217 aa27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 EMSYQ7Z589 1322 aa27.82■■■□□ 2.04
SDR39U1-221ENST00000556707 KRT76Q01546 638 aa27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 ZNF746Q6NUN9 644 aaPredicted RBP27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 ETNPPLQ8TBG4 499 aa27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 PCYT2Q99447 389 aa27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 SMARCAD1Q9H4L7 1026 aa27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 PCDH10Q9P2E7 1040 aa27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 GTF2IRD1Q9UHL9 959 aa27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 TCEAL9Q9UHQ7 104 aa27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 TRIOBPQ9H2D6 2365 aa27.81■■■□□ 2.04
SDR39U1-221ENST00000556707 GAS7O60861 476 aa27.8■■■□□ 2.04
SDR39U1-221ENST00000556707 RAG1P15918 1043 aa27.8■■■□□ 2.04
SDR39U1-221ENST00000556707 LRCH2Q5VUJ6 765 aa27.8■■■□□ 2.04
SDR39U1-221ENST00000556707 GDF6Q6KF10 455 aaPredicted RBP27.8■■■□□ 2.04
SDR39U1-221ENST00000556707 ABHD15Q6UXT9 468 aa27.8■■■□□ 2.04
SDR39U1-221ENST00000556707 GLG1Q92896 1179 aa27.8■■■□□ 2.04
SDR39U1-221ENST00000556707 PSMD10O75832 226 aa27.79■■■□□ 2.04
SDR39U1-221ENST00000556707 MAGEA10P43363 369 aaPredicted RBP27.79■■■□□ 2.04
SDR39U1-221ENST00000556707 GNL2Q13823 731 aaKnown RBP27.79■■■□□ 2.04
SDR39U1-221ENST00000556707 LBHD1Q9BQE6 289 aaPredicted RBP27.79■■■□□ 2.04
SDR39U1-221ENST00000556707 TEKT3Q9BXF9 490 aa27.79■■■□□ 2.04
SDR39U1-221ENST00000556707 AZI2Q9H6S1 392 aa27.79■■■□□ 2.04
SDR39U1-221ENST00000556707 ERAP1Q9NZ08 941 aa27.79■■■□□ 2.04
SDR39U1-221ENST00000556707 IGKV6D-21A0A0A0MT36 114 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 SMIM10L2AP0DMW4 78 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 SMIM10L2BP0DMW5 78 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 ITGB8P26012 769 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 U2AF2P26368 475 aaKnown RBP eCLIP27.78■■■□□ 2.048e-10■■■□□ 14.8
SDR39U1-221ENST00000556707 PTGISQ16647 500 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 NOSTRINQ8IVI9 506 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 SMAP1Q8IYB5 467 aaPredicted RBP27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 GJA10Q969M2 543 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 INTS4Q96HW7 963 aaKnown RBP27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 FAM20AQ96MK3 541 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 GDF15Q99988 308 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 KCNMB3Q9NPA1 279 aa27.78■■■□□ 2.04
SDR39U1-221ENST00000556707 KIF28PB7ZC32 967 aa27.77■■■□□ 2.04
SDR39U1-221ENST00000556707 TIMP1P01033 207 aa27.77■■■□□ 2.04
SDR39U1-221ENST00000556707 MDM2Q00987 491 aaPredicted RBP27.77■■■□□ 2.04
SDR39U1-221ENST00000556707 MIS18BP1Q6P0N0 1132 aa27.77■■■□□ 2.04
SDR39U1-221ENST00000556707 PLPPR4Q7Z2D5 763 aa27.77■■■□□ 2.04
SDR39U1-221ENST00000556707 RNPEPQ9H4A4 650 aa27.77■■■□□ 2.04
SDR39U1-221ENST00000556707 NOD1Q9Y239 953 aa27.77■■■□□ 2.04
SDR39U1-221ENST00000556707 WNT7AO00755 349 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 TBX3O15119 743 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 CYP2C9P11712 490 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 HOXC8P31273 242 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 STAT5BP51692 787 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 LARP1BQ659C4 914 aaKnown RBP27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 POTEDQ86YR6 584 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 HSCBQ8IWL3 235 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 BADQ92934 168 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 CTAGE1Q96RT6 745 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 NOC4LQ9BVI4 516 aaKnown RBP27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 HIPK3Q9H422 1215 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 PCDHA10Q9Y5I2 948 aa27.76■■■□□ 2.03
SDR39U1-221ENST00000556707 RANBP2P49792 3224 aaKnown RBP27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 WDR64B1ANS9 1081 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 H3BQV1 296 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 BACH1O14867 736 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 MARK3P27448 753 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 HIC1Q14526 733 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 FAM160B1Q5W0V3 765 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 CHRDL2Q6WN34 429 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 CCDC60Q8IWA6 550 aaPredicted RBP27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 AFAP1L1Q8TED9 768 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 PPP1R12CQ9BZL4 782 aa27.75■■■□□ 2.03
SDR39U1-221ENST00000556707 UNC45AQ9H3U1 944 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms