RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 CCDC148Q8NFR7 591 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 MYLIPQ8WY64 445 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 DHX38Q92620 1227 aaKnown RBP12.32□□□□□ -0.44
XRCC3-216ENST00000556682 GLG1Q92896 1179 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 VWCEQ96DN2 955 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 GAS2L1Q99501 681 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-216ENST00000556682 RNF26Q9BY78 433 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-216ENST00000556682 ZMYND12Q9H0C1 365 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 SMARCAD1Q9H4L7 1026 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 AZI2Q9H6S1 392 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 JPH1Q9HDC5 661 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-216ENST00000556682 ERAP1Q9NZ08 941 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 PKD2L1Q9P0L9 805 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 SLC9A2Q9UBY0 812 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 NRCAMQ92823 1304 aa12.32□□□□□ -0.44
XRCC3-216ENST00000556682 NID2Q14112 1375 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 ABHD14A-ACY1A0A1B0GW23 586 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 RSPH10B2B2RC85 870 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 CXCL10P02778 98 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 RSPH10BP0C881 870 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 IFNAR1P17181 557 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 HOXC8P31273 242 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 SREBF1P36956 1147 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 CCT2P78371 535 aaKnown RBP12.31□□□□□ -0.44
XRCC3-216ENST00000556682 ARHGAP4P98171 946 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 IKBKEQ14164 716 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 ZNF618Q5T7W0 954 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 JAKMIP3Q5VZ66 844 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 REXO1Q8N1G1 1221 aaKnown RBP12.31□□□□□ -0.44
XRCC3-216ENST00000556682 ZNF274Q96GC6 653 aaPredicted RBP12.31□□□□□ -0.44
XRCC3-216ENST00000556682 PGBD1Q96JS3 809 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 NKX2-4Q9H2Z4 354 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 SETD4Q9NVD3 440 aa12.31□□□□□ -0.44
XRCC3-216ENST00000556682 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 MEIS1O00470 390 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 TREHO43280 583 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 NBNO60934 754 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 CLK2P49760 499 aaKnown RBP12.3□□□□□ -0.44
XRCC3-216ENST00000556682 RABGGTBP53611 331 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
XRCC3-216ENST00000556682 NTRK3Q16288 839 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 TRIM71Q2Q1W2 868 aaKnown RBP12.3□□□□□ -0.44
XRCC3-216ENST00000556682 PPP2R2DQ66LE6 453 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 TAF2Q6P1X5 1199 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 NIPA1Q7RTP0 329 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 RSPH3Q86UC2 560 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 TRIM50Q86XT4 487 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 MAFAQ8NHW3 353 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-216ENST00000556682 PHKBQ93100 1093 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 PDRG1Q9NUG6 133 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 TMEM260Q9NX78 707 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 NFASCO94856 1347 aa12.3□□□□□ -0.44
XRCC3-216ENST00000556682 LGR5O75473 907 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
XRCC3-216ENST00000556682 CYP3A4P08684 503 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 ARP10275 920 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 PPFIA1Q13136 1202 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 TOB2Q14106 344 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-216ENST00000556682 HIC1Q14526 733 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 PKN1Q16512 942 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 PLA2G4DQ86XP0 818 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 HERC6Q8IVU3 1022 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 CYP2W1Q8TAV3 490 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 UPF3BQ9BZI7 483 aaKnown RBP12.29□□□□□ -0.44
XRCC3-216ENST00000556682 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
XRCC3-216ENST00000556682 TCEAL9Q9UHQ7 104 aa12.29□□□□□ -0.44
XRCC3-216ENST00000556682 YBX2Q9Y2T7 364 aaKnown RBP12.29□□□□□ -0.44
XRCC3-216ENST00000556682 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 TLL1O43897 1013 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 CDKL5O76039 1030 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 DEXIO95424 95 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 MARK3P27448 753 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 STAT5BP51692 787 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 NLRP5P59047 1200 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 ANAPC15P60006 121 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 ACTR2P61160 394 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 WDR5P61964 334 aaKnown RBP12.28□□□□□ -0.44
XRCC3-216ENST00000556682 SETQ01105 290 aaPredicted RBP12.28□□□□□ -0.44
XRCC3-216ENST00000556682 GPNMBQ14956 572 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 GRIK4Q16099 956 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 PLPPR4Q7Z2D5 763 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 FAM177A1Q8N128 213 aaPredicted RBP12.28□□□□□ -0.44
XRCC3-216ENST00000556682 LMBR1Q8WVP7 490 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 SEPT8Q92599 483 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 WNT8BQ93098 351 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 C22orf23Q9BZE7 217 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 PRDM12Q9H4Q4 367 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 NCOA5Q9HCD5 579 aaKnown RBP12.28□□□□□ -0.44
XRCC3-216ENST00000556682 TBC1D22BQ9NU19 505 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 TELO2Q9Y4R8 837 aa12.28□□□□□ -0.44
XRCC3-216ENST00000556682 MYH7BA7E2Y1 1941 aa12.27□□□□□ -0.44
XRCC3-216ENST00000556682 IPO5O00410 1097 aaKnown RBP12.27□□□□□ -0.45
XRCC3-216ENST00000556682 PPFIA3O75145 1194 aa12.27□□□□□ -0.45
XRCC3-216ENST00000556682 MYOGP15173 224 aa12.27□□□□□ -0.45
XRCC3-216ENST00000556682 SLC26A2P50443 739 aa12.27□□□□□ -0.45
XRCC3-216ENST00000556682 ADAM17P78536 824 aa12.27□□□□□ -0.45
XRCC3-216ENST00000556682 ANKRD1Q15327 319 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms