RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CCDC40Q4G0X9 1142 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 LRCH2Q5VUJ6 765 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 IL31RAQ8NI17 732 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 BHMT2Q9H2M3 363 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 IKZF4Q9H2S9 585 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 MMRN2Q9H8L6 949 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.61
TMEM260-211ENST00000556648 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 ZNF446Q9NWS9 450 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 WRAP73Q9P2S5 460 aaPredicted RBP11.21□□□□□ -0.61
TMEM260-211ENST00000556648 DNM3Q9UQ16 869 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 MRPL11Q9Y3B7 192 aaKnown RBP11.21□□□□□ -0.61
TMEM260-211ENST00000556648 COL4A3BPQ9Y5P4 624 aa11.21□□□□□ -0.61
TMEM260-211ENST00000556648 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 A0A1W2PQJ5 194 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 NFIBO00712 420 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 ZNF263O14978 683 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 PSMD10O75832 226 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.62
TMEM260-211ENST00000556648 ASNSP08243 561 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 H2AFXP16104 143 aaPredicted RBP11.21□□□□□ -0.62
TMEM260-211ENST00000556648 GMPSP49915 693 aaPredicted RBP11.21□□□□□ -0.62
TMEM260-211ENST00000556648 TGFB2P61812 414 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 FKBP3Q00688 224 aaKnown RBP11.21□□□□□ -0.62
TMEM260-211ENST00000556648 TBC1D10BQ4KMP7 808 aaPredicted RBP11.21□□□□□ -0.62
TMEM260-211ENST00000556648 FIGNQ5HY92 759 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 RETREG2Q8NC44 543 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 JDP2Q8WYK2 163 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 BAP1Q92560 729 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 SLC5A5Q92911 643 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 HOOK2Q96ED9 719 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 POLR3CQ9BUI4 534 aaPredicted RBP11.21□□□□□ -0.62
TMEM260-211ENST00000556648 TANGO6Q9C0B7 1094 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 ZSWIM4Q9H7M6 989 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 PKD2L1Q9P0L9 805 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 CCPG1Q9ULG6 757 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 GUCA1BQ9UMX6 200 aa11.21□□□□□ -0.62
TMEM260-211ENST00000556648 LRRC53A6NM62 1247 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 PLA2G6O60733 806 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 PRPF6O94906 941 aaKnown RBP11.2□□□□□ -0.62
TMEM260-211ENST00000556648 EYA4O95677 639 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 ZNF280AP59817 542 aaPredicted RBP11.2□□□□□ -0.62
TMEM260-211ENST00000556648 CYP27A1Q02318 531 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 TEX35Q5T0J7 233 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 EPM2AIP1Q7L775 607 aaPredicted RBP11.2□□□□□ -0.62
TMEM260-211ENST00000556648 TPH2Q8IWU9 490 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 ZC3H3Q8IXZ2 948 aaKnown RBP11.2□□□□□ -0.62
TMEM260-211ENST00000556648 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 CLEC4DQ8WXI8 215 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 LACRTQ9GZZ8 138 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 UNC45AQ9H3U1 944 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 SH2D4AQ9H788 454 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 FZD1Q9UP38 647 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 RABGAP1Q9Y3P9 1069 aa11.2□□□□□ -0.62
TMEM260-211ENST00000556648 SFI1A8K8P3 1242 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 DDX39AO00148 427 aaKnown RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 SLITRK3O94933 977 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 CBX1P83916 185 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 KCNA1Q09470 495 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 PPP2R5CQ13362 524 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 CEP55Q53EZ4 464 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 MUM1L1Q5H9M0 696 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 FOXR2Q6PJQ5 311 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 RSRC2Q7L4I2 434 aaKnown RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 UBXN4Q92575 508 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 JAKMIP2Q96AA8 810 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 CEP63Q96MT8 703 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 HSD17B14Q9BPX1 270 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 RAVER2Q9HCJ3 691 aaKnown RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 HOMER2Q9NSB8 354 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 ZNHIT6Q9NWK9 470 aaKnown RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 ARHGAP20Q9P2F6 1191 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 PUF60Q9UHX1 559 aaKnown RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 BCS1LQ9Y276 419 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 GJA3Q9Y6H8 435 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 CTAGE9A4FU28 777 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 EFCAB8A8MWE9 144 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 GAS7O60861 476 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 NOL4O94818 638 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 ICAM1P05362 532 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 ITGB5P18084 799 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 HOXA7P31268 230 aaPredicted RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 HSD17B4P51659 736 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 CLCN6P51797 869 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 TNIP1Q15025 636 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 PRAMEF18Q5VWM3 479 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 RINT1Q6NUQ1 792 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 RRAGAQ7L523 313 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 TRIM59Q8IWR1 403 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 CPXCR1Q8N123 301 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
TMEM260-211ENST00000556648 ZNF577Q9BSK1 485 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 CRACR2AQ9BSW2 395 aa11.19□□□□□ -0.62
TMEM260-211ENST00000556648 HACL1Q9UJ83 578 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms