RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 TDRD7Q8NHU6 1098 aaKnown RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 NCOA7Q8NI08 942 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 FAM227BQ96M60 508 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 NEUROD6Q96NK8 337 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 DNAJC2Q99543 621 aaKnown RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 FEZ1Q99689 392 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 BPIFA3Q9BQP9 254 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 SIL1Q9H173 461 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 GSX1Q9H4S2 264 aaPredicted RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 CYP4F12Q9HCS2 524 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 ZNF277Q9NRM2 450 aaPredicted RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 TMEM39AQ9NV64 488 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 DACT1Q9NYF0 836 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 FAM8A1Q9UBU6 413 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 PA2G4Q9UQ80 394 aaKnown RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 HIF3AQ9Y2N7 669 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 AK5Q9Y6K8 562 aa7.02□□□□□ -1.29
CPSF2-205ENST00000556622 GOLGB1Q14789 3259 aaKnown RBP7.02□□□□□ -1.29
CPSF2-205ENST00000556622 ARFGEF1Q9Y6D6 1849 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 BRCA1P38398 1863 aaKnown RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 A0A0D9SFI3 127 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 CCDC196A0A1B0GTZ2 297 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 ZNF213O14771 459 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 PDE8AO60658 829 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 GNAT2P19087 354 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 RFX5P48382 616 aaPredicted RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 PRELPP51888 382 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 RPS8P62241 208 aaKnown RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 IFIT5Q13325 482 aaKnown RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 GRAPQ13588 217 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 TOB2Q14106 344 aaPredicted RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 SART3Q15020 963 aaKnown RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 CCDC152Q4G0S7 254 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 CT47A1Q5JQC4 288 aaPredicted RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 LMBR1LQ6UX01 489 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 PDZD3Q86UT5 571 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 ELOA2Q8IYF1 753 aaPredicted RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 GRAPLQ8TC17 118 aaPredicted RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 KIAA1524Q8TCG1 905 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 JDP2Q8WYK2 163 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 KAZALD1Q96I82 304 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 TIGD1Q96MW7 591 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 SDF4Q9BRK5 362 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 PLA2G12BQ9BX93 195 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 RTEL1Q9NZ71 1219 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 DBNLQ9UJU6 430 aaKnown RBP7.01□□□□□ -1.29
CPSF2-205ENST00000556622 ATP6V0A2Q9Y487 856 aa7.01□□□□□ -1.29
CPSF2-205ENST00000556622 CCDC88AQ3V6T2 1871 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 GOLGA6L9A6NEM1 432 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 GLTPD2A6NH11 291 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 TPM1P09493 284 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 XBP1P17861 261 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 IARSP41252 1262 aaKnown RBP7□□□□□ -1.29
CPSF2-205ENST00000556622 KCNJ6P48051 423 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 ME1P48163 572 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 RCAN1P53805 252 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 EXOSC10Q01780 885 aaKnown RBP7□□□□□ -1.29
CPSF2-205ENST00000556622 PPP2R3AQ06190 1150 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 SOX4Q06945 474 aaPredicted RBP7□□□□□ -1.29
CPSF2-205ENST00000556622 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
CPSF2-205ENST00000556622 SAFBQ15424 915 aaKnown RBP eCLIP7□□□□□ -1.29
CPSF2-205ENST00000556622 SCARA3Q6AZY7 606 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 TMC4Q7Z404 712 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 TTC6Q86TZ1 520 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 SHISA5Q8N114 240 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 NECAB1Q8N987 351 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 CCDC150Q8NCX0 1101 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 CCDC112Q8NEF3 446 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 MRPS27Q92552 414 aaKnown RBP7□□□□□ -1.29
CPSF2-205ENST00000556622 APPBP2Q92624 585 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 BRF1Q92994 677 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 TMEM87BQ96K49 555 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 NECAB3Q96P71 396 aaPredicted RBP7□□□□□ -1.29
CPSF2-205ENST00000556622 PYM1Q9BRP8 204 aaKnown RBP7□□□□□ -1.29
CPSF2-205ENST00000556622 KCND1Q9NSA2 647 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 KRT82Q9NSB4 513 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 CGNQ9P2M7 1197 aaKnown RBP7□□□□□ -1.29
CPSF2-205ENST00000556622 CLIP2Q9UDT6 1046 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 CEP131Q9UPN4 1083 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 SBF1O95248 1867 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 LTBP3Q9NS15 1303 aa7□□□□□ -1.29
CPSF2-205ENST00000556622 CACNA1SQ13698 1873 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 PTPDC1A2A3K4 754 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 GOLIM4O00461 696 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 CYP21A2P08686 494 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 HSPD1P10809 573 aaKnown RBP6.99□□□□□ -1.29
CPSF2-205ENST00000556622 PCP11498 1178 aaKnown RBP6.99□□□□□ -1.29
CPSF2-205ENST00000556622 C1QTNF8P60827 252 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 DAB2P98082 770 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 RESTQ13127 1097 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 STK38Q15208 465 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 ANO6Q4KMQ2 910 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 DPP8Q6V1X1 898 aaPredicted RBP6.99□□□□□ -1.29
CPSF2-205ENST00000556622 CDC37L1Q7L3B6 337 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 CREBRFQ8IUR6 639 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 ANKRD18AQ8IVF6 992 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 CCAR1Q8IX12 1150 aaKnown RBP6.99□□□□□ -1.29
CPSF2-205ENST00000556622 SUPT20HQ8NEM7 779 aa6.99□□□□□ -1.29
CPSF2-205ENST00000556622 CELF1Q92879 486 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms