RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 HS1BP3Q53T59 392 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 VPS53Q5VIR6 699 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 CAVIN1Q6NZI2 390 aaKnown RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 RNF111Q6ZNA4 994 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 COPS6Q7L5N1 327 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 TMC3Q7Z5M5 1100 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 AACSQ86V21 672 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 TTC5Q8N0Z6 440 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 ZNF655Q8N720 491 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 MAP4K1Q92918 833 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 RNF34Q969K3 372 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 TCTN2Q96GX1 697 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 KAZALD1Q96I82 304 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 ZNF512BQ96KM6 892 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 PANK2Q9BZ23 570 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 RNF32Q9H0A6 362 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 ALDH8A1Q9H2A2 487 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 EPB41L4BQ9H329 900 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 BICC1Q9H694 974 aaKnown RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 SP110Q9HB58 689 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 DCP1AQ9NPI6 582 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 CYP46A1Q9Y6A2 500 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 COL15A1P39059 1388 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 TRPM3Q9HCF6 1732 aaPredicted RBP4.74□□□□□ -1.65
TGFB3-205ENST00000556507 TUBGCP6Q96RT7 1819 aa4.74□□□□□ -1.65
TGFB3-205ENST00000556507 ADAMTS7Q9UKP4 1686 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 PRAMEF22A3QJZ6 481 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 ERVV-2B6SEH9 535 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 TNFRSF10CO14798 259 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 IGKV5-2P06315 115 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 ZSCAN22P10073 491 aaPredicted RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 IMPDH2P12268 514 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 ATP5JP18859 108 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 PCBP3P57721 371 aaKnown RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 SLC39A6Q13433 755 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 ANKRD1Q15327 319 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 NR0B2Q15466 257 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 LRSAM1Q6UWE0 723 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 RUFY3Q7L099 469 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 TMEM192Q8IY95 271 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 ANKS4BQ8N8V4 417 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 PLBD2Q8NHP8 589 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 GPT2Q8TD30 523 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 EAF2Q96CJ1 260 aaPredicted RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 ZNF496Q96IT1 587 aaPredicted RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 SLC6A18Q96N87 628 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 MYD88Q99836 296 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 UPF3BQ9BZI7 483 aaKnown RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 FOXP3Q9BZS1 431 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 PRDM14Q9GZV8 571 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 MKRN2Q9H000 416 aaKnown RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 RRAGDQ9NQL2 400 aaPredicted RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 PDRG1Q9NUG6 133 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 EBF1Q9UH73 591 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 ZMYM5Q9UJ78 669 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 TCFL5Q9UL49 500 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 PA2G4Q9UQ80 394 aaKnown RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 SMC3Q9UQE7 1217 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 PCDHGB7Q9Y5F8 929 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 CPDO75976 1380 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 PXDNQ92626 1479 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 SIPA1L3O60292 1781 aaPredicted RBP4.73□□□□□ -1.65
TGFB3-205ENST00000556507 RGPD2P0DJD1 1756 aa4.73□□□□□ -1.65
TGFB3-205ENST00000556507 SPATA31A3Q5VYP0 1347 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 NFIBO00712 420 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 SIGLEC6O43699 453 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 STX6O43752 255 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 PRAMEF1O95521 474 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 TSPAN15O95858 294 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 TMEM253P0C7T8 217 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 MYL6BP14649 208 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 CASTP20810 708 aaKnown RBP4.72□□□□□ -1.65
TGFB3-205ENST00000556507 PDCP20941 246 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 KCNJ4P48050 445 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 AK2P54819 239 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 PTH1RQ03431 593 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 KRT32Q14532 448 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 SNX17Q15036 470 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 RABL6Q3YEC7 729 aaPredicted RBP4.72□□□□□ -1.65
TGFB3-205ENST00000556507 TIGD5Q53EQ6 642 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 CREB3L3Q68CJ9 461 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 LRP10Q7Z4F1 713 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 LINC00116Q8NCU8 138 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 LINC01599Q8WXQ3 324 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 DHRS1Q96LJ7 313 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 JAKMIP1Q96N16 626 aaKnown RBP4.72□□□□□ -1.65
TGFB3-205ENST00000556507 FERD3LQ96RJ6 166 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 SLC9A7Q96T83 725 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 CCDC8Q9H0W5 538 aaPredicted RBP4.72□□□□□ -1.65
TGFB3-205ENST00000556507 SLC6A17Q9H1V8 727 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 IL25Q9H293 177 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 KCNK12Q9HB15 430 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 GPR108Q9NPR9 543 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 HMG20BQ9P0W2 317 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 KIAA1522Q9P206 1035 aaPredicted RBP4.72□□□□□ -1.65
TGFB3-205ENST00000556507 GPR160Q9UJ42 338 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 FBXL21Q9UKT6 434 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 ZNRF3Q9ULT6 936 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 ZNF281Q9Y2X9 895 aa4.72□□□□□ -1.65
TGFB3-205ENST00000556507 PCDHB12Q9Y5F1 795 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms