RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 BACH1O14867 736 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 CTAGE5O15320 804 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 ZEB2O60315 1214 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 ZNF286BP0CG31 522 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 TCF7P36402 384 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 KRT85P78386 507 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 KCNA10Q16322 511 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 DGKDQ16760 1214 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 ZNF746Q6NUN9 644 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 MIER3Q7Z3K6 550 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 SEPT1Q8WYJ6 367 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 POTEMA6NI47 508 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 WDR64B1ANS9 1081 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 NASPP49321 788 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 PTPAQ15257 358 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 MIS18BP1Q6P0N0 1132 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 PCSK9Q8NBP7 692 aaKnown RBP15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 CRISPLD2Q9H0B8 497 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 DISC1Q9NRI5 854 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 MCM3APO60318 1980 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 GSTTP1A0A1W2PQM5 241 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 ASGR1P07306 291 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 PRPHP41219 470 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 JAK3P52333 1124 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 PPP2R5CQ13362 524 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 SLC39A14Q15043 492 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 ATL3Q6DD88 541 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 CXCL17Q6UXB2 119 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 TRIM50Q86XT4 487 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 SMAP1Q8IYB5 467 aaPredicted RBP15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 KLHDC9Q8NEP7 349 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 GLG1Q92896 1179 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 VTI1AQ96AJ9 217 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 AZI2Q9H6S1 392 aa15.81■□□□□ 0.12
VIPAS39-208ENST00000556412 EML1O00423 815 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 DNM1LO00429 736 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 SPTLC2O15270 562 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 PPFIA4O75335 1185 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 PSAPP07602 524 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 SUPT20HL2P0C7V6 817 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 CST5P28325 142 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 SFNP31947 248 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 SOX10P56693 466 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 IL17AQ16552 155 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 SWSAP1Q6NVH7 229 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 TRMT1LQ7Z2T5 733 aaKnown RBP15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 RAB34Q9BZG1 259 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 PCDHA10Q9Y5I2 948 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 MYH7BA7E2Y1 1941 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 YEATS4O95619 227 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 LGALS2P05162 132 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 EN2P19622 333 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 ACLYP53396 1101 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 SPIRE1Q08AE8 756 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 TPRNQ4KMQ1 711 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 ARL6IP4Q66PJ3 421 aaKnown RBP15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 ABHD15Q6UXT9 468 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 SPATA32Q96LK8 384 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 GDPD2Q9HCC8 539 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 GABBR1Q9UBS5 961 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 LRWD1Q9UFC0 647 aa15.8■□□□□ 0.12
VIPAS39-208ENST00000556412 MARK3P27448 753 aa15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 ME1P48163 572 aa15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 NKX3-2P78367 333 aa15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 PURAQ00577 322 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 CYP4A11Q02928 519 aa15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 GRIN1Q05586 938 aa15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 B3GNT9Q6UX72 402 aa15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 BANK1Q8NDB2 785 aa15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 TNPO1Q92973 898 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 ZNF302Q9NR11 478 aa15.79■□□□□ 0.12
VIPAS39-208ENST00000556412 MOXD2PA6NHM9 499 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 PP2D1A8MPX8 630 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 KPNA6O60684 536 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 PSMC6P62333 389 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 ZRSR1Q15695 479 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 FAM160B1Q5W0V3 765 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 CCSAPQ6IQ19 270 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 CCDC60Q8IWA6 550 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 CKAP2LQ8IYA6 745 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 ERMNQ8TAM6 284 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 KCNG4Q8TDN1 519 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 DIS3LQ8TF46 1054 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 PPP1R13LQ8WUF5 828 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 CLIC6Q96NY7 704 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 MTG1Q9BT17 334 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 FBXO2Q9UK22 296 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 ZNF215Q9UL58 517 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 ATG7O95352 703 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 CDC25AP30304 524 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 STAT5BP51692 787 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 EPHA7Q15375 998 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 SPECC1Q5M775 1068 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 PDXDC2PQ6P474 469 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 RDM1Q8NG50 284 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms