RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ATP9AO75110 1047 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 SCG2P13521 617 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 GNA11P29992 359 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 SREBF1P36956 1147 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 KCNJ6P48051 423 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 ADAM17P78536 824 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
SNX6-207ENST00000556303 APOBRQ0VD83 1088 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 IKBKEQ14164 716 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 CEP55Q53EZ4 464 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 ZNF618Q5T7W0 954 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 TYW1BQ6NUM6 668 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 TRAF7Q6Q0C0 670 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 NIPA1Q7RTP0 329 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 RPAINQ86UA6 219 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.41□□□□□ -0.1
SNX6-207ENST00000556303 TM6SF1Q9BZW5 370 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 ZMYND12Q9H0C1 365 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 NKX2-4Q9H2Z4 354 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 SMARCAD1Q9H4L7 1026 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 PPP4R2Q9NY27 417 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 ERAP1Q9NZ08 941 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 NAP1L2Q9ULW6 460 aaPredicted RBP14.41□□□□□ -0.1
SNX6-207ENST00000556303 YBX2Q9Y2T7 364 aaKnown RBP14.41□□□□□ -0.1
SNX6-207ENST00000556303 TTC28Q96AY4 2481 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 RSPH10B2B2RC85 870 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 MEIS1O00470 390 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 RSPH10BP0C881 870 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 TCF7P36402 384 aaPredicted RBP14.4□□□□□ -0.1
SNX6-207ENST00000556303 THPOP40225 353 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 AKAP17AQ02040 695 aaKnown RBP14.4□□□□□ -0.1
SNX6-207ENST00000556303 HIC1Q14526 733 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 TAF2Q6P1X5 1199 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 RUFY3Q7L099 469 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 HERC6Q8IVU3 1022 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 RNF26Q9BY78 433 aaPredicted RBP14.4□□□□□ -0.1
SNX6-207ENST00000556303 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 ZSWIM6Q9HCJ5 1215 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 C6orf50Q9HD87 102 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 JPH1Q9HDC5 661 aaPredicted RBP14.4□□□□□ -0.1
SNX6-207ENST00000556303 KCNH7Q9NS40 1196 aa14.4□□□□□ -0.1
SNX6-207ENST00000556303 GSTTP1A0A1W2PQM5 241 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 TREHO43280 583 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
SNX6-207ENST00000556303 LGR5O75473 907 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 CYP3A4P08684 503 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 CPA1P15085 419 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 IFNAR1P17181 557 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 RABGGTBP53611 331 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 WDR5P61964 334 aaKnown RBP14.39□□□□□ -0.11
SNX6-207ENST00000556303 UTP14CQ5TAP6 766 aaKnown RBP14.39□□□□□ -0.11
SNX6-207ENST00000556303 PPP2R2DQ66LE6 453 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 FAM177A1Q8N128 213 aaPredicted RBP14.39□□□□□ -0.11
SNX6-207ENST00000556303 BICD2Q8TD16 824 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 WNT8BQ93098 351 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 SDF4Q9BRK5 362 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 CYP46A1Q9Y6A2 500 aa14.39□□□□□ -0.11
SNX6-207ENST00000556303 POU3F3P20264 500 aaPredicted RBP14.38□□□□□ -0.11
SNX6-207ENST00000556303 SLC26A2P50443 739 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 ARHGAP4P98171 946 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 NTRK3Q16288 839 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 PKN1Q16512 942 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 FAM26DQ5JW98 314 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 PLPPR4Q7Z2D5 763 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 CCDC148Q8NFR7 591 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 GLG1Q92896 1179 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 ZNF274Q96GC6 653 aaPredicted RBP14.38□□□□□ -0.11
SNX6-207ENST00000556303 PRDM12Q9H4Q4 367 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 AZI2Q9H6S1 392 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 SH3GLB2Q9NR46 395 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 SETD4Q9NVD3 440 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 NCOR1O75376 2440 aa14.38□□□□□ -0.11
SNX6-207ENST00000556303 MBLAC1A4D2B0 266 aaPredicted RBP14.37□□□□□ -0.11
SNX6-207ENST00000556303 RRN3P2A6NIE6 340 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 DLL1O00548 723 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 TLL1O43897 1013 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 ATG7O95352 703 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 CA3P07451 260 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 PDIA3P30101 505 aaKnown RBP14.37□□□□□ -0.11
SNX6-207ENST00000556303 ZNF76P36508 570 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 SETQ01105 290 aaPredicted RBP14.37□□□□□ -0.11
SNX6-207ENST00000556303 SP4Q02446 784 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 MBTPS1Q14703 1052 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 PLEKHG4Q58EX7 1191 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 FAM43BQ6ZT52 329 aaPredicted RBP14.37□□□□□ -0.11
SNX6-207ENST00000556303 RSPH3Q86UC2 560 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 REXO1Q8N1G1 1221 aaKnown RBP14.37□□□□□ -0.11
SNX6-207ENST00000556303 LMBR1Q8WVP7 490 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 CRYGNQ8WXF5 182 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 APBB2Q92870 758 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 RAD9AQ99638 391 aa14.37□□□□□ -0.11
SNX6-207ENST00000556303 AGO4Q9HCK5 861 aaKnown RBP14.37□□□□□ -0.11
SNX6-207ENST00000556303 GBF1Q92538 1859 aa14.36□□□□□ -0.11
SNX6-207ENST00000556303 DOCK5Q9H7D0 1870 aa14.36□□□□□ -0.11
SNX6-207ENST00000556303 GJB5O95377 273 aa14.36□□□□□ -0.11
SNX6-207ENST00000556303 MYOGP15173 224 aa14.36□□□□□ -0.11
SNX6-207ENST00000556303 PPFIA1Q13136 1202 aa14.36□□□□□ -0.11
SNX6-207ENST00000556303 MKRN4PQ13434 485 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms