RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 LRRC47Q8N1G4 583 aaKnown RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 FBXO18Q8NFZ0 1043 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 TRPM4Q8TD43 1214 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 PIBF1Q8WXW3 757 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 CHAMP1Q96JM3 812 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 AIFM3Q96NN9 605 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 LPIN3Q9BQK8 851 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 LZTS2Q9BRK4 669 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 RNF26Q9BY78 433 aaPredicted RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 DEFB129Q9H1M3 183 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 ZSCAN16Q9H4T2 348 aaPredicted RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 VAT1LQ9HCJ6 419 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 GJB4Q9NTQ9 266 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 NYAP2Q9P242 653 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 STIM2Q9P246 746 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 PGAP2Q9UHJ9 254 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 USP20Q9Y2K6 914 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 ADAMTSL1Q8N6G6 1762 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 CDK5RAP2Q96SN8 1893 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 ZNF646O15015 1829 aaPredicted RBP7.31□□□□□ -1.24
HIF1A-208ENST00000556237 PSME4Q14997 1843 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 STK36Q9NRP7 1315 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 hCG_1642624A0A1W2PR95 340 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 KLRF2D3W0D1 207 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 UBE2Q2LH0YL09 131 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 GOLGA8HP0CJ92 632 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 XBP1P17861 261 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 NCLP19338 710 aaKnown RBP7.31□□□□□ -1.24
HIF1A-208ENST00000556237 BRD2P25440 801 aaKnown RBP7.31□□□□□ -1.24
HIF1A-208ENST00000556237 CAP2P40123 477 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 JAG1P78504 1218 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 DNM1Q05193 864 aaKnown RBP7.31□□□□□ -1.24
HIF1A-208ENST00000556237 SHROOM1Q2M3G4 852 aaPredicted RBP7.31□□□□□ -1.24
HIF1A-208ENST00000556237 NBPF12Q5TAG4 269 aaPredicted RBP7.31□□□□□ -1.24
HIF1A-208ENST00000556237 PRAMEF18Q5VWM3 479 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 SLFN13Q68D06 897 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 KRT40Q6A162 431 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 FAM173BQ6P4H8 233 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 IGF2-ASQ6U949 168 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 CLEC10AQ8IUN9 316 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 SIAH1Q8IUQ4 282 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 APOBEC3FQ8IUX4 373 aaKnown RBP7.31□□□□□ -1.24
HIF1A-208ENST00000556237 HELQQ8TDG4 1101 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 MKL1Q969V6 931 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 TEPSINQ96N21 525 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 UBA5Q9GZZ9 404 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 ADARB2Q9NS39 739 aaKnown RBP7.31□□□□□ -1.24
HIF1A-208ENST00000556237 MAD2L2Q9UI95 211 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 NID2Q14112 1375 aa7.31□□□□□ -1.24
HIF1A-208ENST00000556237 COL2A1P02458 1487 aaPredicted RBP7.3□□□□□ -1.24
HIF1A-208ENST00000556237 FRMPD2Q68DX3 1309 aaPredicted RBP7.3□□□□□ -1.24
HIF1A-208ENST00000556237 GLTPD2A6NH11 291 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 PDHBP11177 359 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 PTMSP20962 102 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 SMARCA1P28370 1054 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 SERPINB4P48594 390 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 ICA1Q05084 483 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 PDE4CQ08493 712 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 RESTQ13127 1097 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 GNL2Q13823 731 aaKnown RBP7.3□□□□□ -1.24
HIF1A-208ENST00000556237 SAFBQ15424 915 aaKnown RBP eCLIP7.3□□□□□ -1.24
HIF1A-208ENST00000556237 PKN1Q16512 942 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 PERM1Q5SV97 790 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 DCAF15Q66K64 600 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 ELMSAN1Q6PJG2 1045 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 USP48Q86UV5 1035 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 DCPSQ96C86 337 aaKnown RBP7.3□□□□□ -1.24
HIF1A-208ENST00000556237 HOOK2Q96ED9 719 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 ZNF396Q96N95 335 aaPredicted RBP7.3□□□□□ -1.24
HIF1A-208ENST00000556237 ANP32EQ9BTT0 268 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 ISY1Q9ULR0 285 aaKnown RBP7.3□□□□□ -1.24
HIF1A-208ENST00000556237 KCNJ14Q9UNX9 436 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 CNPY2Q9Y2B0 182 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 LAMB1P07942 1786 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 PLIN4Q96Q06 1357 aa7.3□□□□□ -1.24
HIF1A-208ENST00000556237 FOCADQ5VW36 1801 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 ECM29Q5VYK3 1845 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 F5H6K3 240 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 CYTH3O43739 400 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 SCG2P13521 617 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 NLRP5P59047 1200 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 KRT85P78386 507 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 KLRC3Q07444 240 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 ECM1Q16610 540 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 CCDC96Q2M329 555 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 SUPT20HL1Q3ZLR7 823 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 ASPRV1Q53RT3 343 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 TTBK2Q6IQ55 1244 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 PRR23CQ6ZRP0 262 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 TTC9Q92623 222 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 MEGF10Q96KG7 1140 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 TRAIPQ9BWF2 469 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 ZNF341Q9BYN7 854 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 CPVLQ9H3G5 476 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 LMBRD1Q9NUN5 540 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 GGA3Q9NZ52 723 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 VPS54Q9P1Q0 977 aa7.29□□□□□ -1.24
HIF1A-208ENST00000556237 CFAP45Q9UL16 551 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms