RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 MEIS1O00470 390 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 KPNA6O60684 536 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 LGR5O75473 907 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 EIF2AK2P19525 551 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 CNGA1P29973 690 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 CPT1AP50416 773 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 HMGN5P82970 282 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 BEX3Q00994 111 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 TTLL4Q14679 1199 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 TRIM71Q2Q1W2 868 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 NFRKBQ6P4R8 1299 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 CLEC17AQ6ZS10 378 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 SH3RF1Q7Z6J0 888 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 NSUN7Q8NE18 718 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 CUL5Q93034 780 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 PHKBQ93100 1093 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 GLT8D2Q9H1C3 349 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 SEC63Q9UGP8 760 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 B4DLN1 442 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 FAM86B1E9PN63 330 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 GOLGA6L22H0YM25 854 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 MAFGO15525 162 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 FIBPO43427 364 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 ATP9AO75110 1047 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 DEXIO95424 95 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 FOSP01100 380 aaPredicted RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 GH1P01241 217 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 FAM86B2P0C5J1 330 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 TXNP10599 105 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 BRD2P25440 801 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 ADCY7P51828 1080 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 MRPL12P52815 198 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 ITGB3BPQ13352 177 aaPredicted RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 LAMC2Q13753 1193 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 GPNMBQ14956 572 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 ANKRD1Q15327 319 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 MCTP2Q6DN12 878 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 SYNE3Q6ZMZ3 975 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 HEATR3Q7Z4Q2 680 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 PCYT2Q99447 389 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 MPHOSPH6Q99547 160 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 GPR20Q99678 358 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 MXRA8Q9BRK3 442 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 RBSNQ9H1K0 784 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 TMEM260Q9NX78 707 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 CHD9Q3L8U1 2897 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 SMCO2A6NFE2 343 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 DYNC1LI2O43237 492 aaPredicted RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 CD2BP2O95400 341 aaKnown RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 HSDL1Q3SXM5 330 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 GALNT17Q6IS24 598 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 METTL7BQ6UX53 244 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 C16orf59Q7L2K0 433 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 EEPD1Q7L9B9 569 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 OR6J1Q8NGC5 347 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 TSC1Q92574 1164 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 DHX38Q92620 1227 aaKnown RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 MTG1Q9BT17 334 aaPredicted RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 ANO3Q9BYT9 981 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 POLR3EQ9NVU0 708 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 PCDHA4Q9UN74 947 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 MROH7Q68CQ1 1323 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 EMSYQ7Z589 1322 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 GSTTP1A0A1W2PQM5 241 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 DHX16O60231 1041 aaKnown RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 EVI5O60447 810 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 B4GALT4O60513 344 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 PPFIA4O75335 1185 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 TIMP1P01033 207 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 CLTBP09497 229 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 C6orf222P0C671 652 aaPredicted RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 MAGEA10P43363 369 aaPredicted RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 EPHB4P54760 987 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 CCT2P78371 535 aaKnown RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 TLE2Q04725 743 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 ITGA7Q13683 1181 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 Q4G0T1 1027 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 GNASQ5JWF2 1037 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 MOXD1Q6UVY6 613 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 CXCL17Q6UXB2 119 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 ZNF771Q7L3S4 317 aaPredicted RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 C7orf61Q8IZ16 206 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 CYP2W1Q8TAV3 490 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 AFG1LQ8WV93 481 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 SECISBP2LQ93073 1101 aaKnown RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 AIFM3Q96NN9 605 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 LARP6Q9BRS8 491 aaKnown RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 WNT8AQ9H1J5 351 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 AGO4Q9HCK5 861 aaKnown RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 COLQQ9Y215 455 aaPredicted RBP4.45□□□□□ -1.7
LINC00648-202ENST00000555985 CDH23Q9H251 3354 aa4.45□□□□□ -1.7
LINC00648-202ENST00000555985 CCNE2O96020 404 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 USP11P51784 963 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 NAPAP54920 295 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 PSMC6P62333 389 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 ARHGAP4P98171 946 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 ZSCAN23Q3MJ62 389 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 EARS2Q5JPH6 523 aaKnown RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 SEPT14Q6ZU15 432 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 RPAINQ86UA6 219 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms