RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 Q7L0L9 218 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 AFAP1L1Q8TED9 768 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 CRYGNQ8WXF5 182 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 SCLYQ96I15 445 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 ALG1Q9BT22 464 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 TMEM260Q9NX78 707 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 MTMR10Q9NXD2 777 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 CHMP5Q9NZZ3 219 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 H3BRB1 525 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 ATP9AO75110 1047 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 PPFIA3O75145 1194 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 FGBP02675 491 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 IQCF3P0C7M6 154 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 FDPSP14324 419 aaKnown RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 ARHGAP4P98171 946 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 PTK7Q13308 1070 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 HIC1Q14526 733 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 TRIM71Q2Q1W2 868 aaKnown RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 CEP55Q53EZ4 464 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 ZNF697Q5TEC3 545 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 NIPA1Q7RTP0 329 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 SERINC5Q86VE9 423 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 TRIM50Q86XT4 487 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 RPUSD2Q8IZ73 545 aaKnown RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 REXO1Q8N1G1 1221 aaKnown RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 CCDC148Q8NFR7 591 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 PGBD1Q96JS3 809 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 C8orf76Q96K31 380 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 MXRA8Q9BRK3 442 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 MTIF3Q9H2K0 278 aaKnown RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 TUT1Q9H6E5 874 aaKnown RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 C6orf50Q9HD87 102 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 KCNH7Q9NS40 1196 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 CXXC1Q9P0U4 656 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 ZNF215Q9UL58 517 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-215ENST00000555616 TELO2Q9Y4R8 837 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 CHD9Q3L8U1 2897 aa10.95□□□□□ -0.66
ACTN1-215ENST00000555616 NFASCO94856 1347 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 EMSYQ7Z589 1322 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 MEIS1O00470 390 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 ADAMTS3O15072 1205 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 STX6O43752 255 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 DTNBO60941 627 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 SMIM10L2AP0DMW4 78 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 SMIM10L2BP0DMW5 78 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 SELPP16109 830 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 SYT1P21579 422 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 DNAJB2P25686 324 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 GNA11P29992 359 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 DDIT3P35638 169 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 SP4Q02446 784 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 TRAF7Q6Q0C0 670 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 LRRC8DQ7L1W4 858 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 FAM177A1Q8N128 213 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-215ENST00000555616 RETREG2Q8NC44 543 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 CYP2W1Q8TAV3 490 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 WNT8BQ93098 351 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 JPH1Q9HDC5 661 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-215ENST00000555616 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
ACTN1-215ENST00000555616 COL6A3P12111 3177 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 IGLV3-22A0A075B6J6 115 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 GSTTP1A0A1W2PQM5 241 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 C17orf102A2RUQ5 167 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 VPS37CA5D8V6 355 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-215ENST00000555616 PARNO95453 639 aaKnown RBP10.93□□□□□ -0.66
ACTN1-215ENST00000555616 CYP3A4P08684 503 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 CKBP12277 381 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 TCF7P36402 384 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-215ENST00000555616 ZNF200P98182 395 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-215ENST00000555616 ITGB3BPQ13352 177 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-215ENST00000555616 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
ACTN1-215ENST00000555616 JAKMIP3Q5VZ66 844 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 OTOP2Q7RTS6 562 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 BICD2Q8TD16 824 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 GUCD1Q96NT3 240 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 TTYH1Q9H313 450 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-215ENST00000555616 AGO4Q9HCK5 861 aaKnown RBP10.93□□□□□ -0.66
ACTN1-215ENST00000555616 PKD2L1Q9P0L9 805 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 VPS54Q9P1Q0 977 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 STXBP5LQ9Y2K9 1186 aa10.93□□□□□ -0.66
ACTN1-215ENST00000555616 FAM86B1E9PN63 330 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 CAND2O75155 1236 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 LGR5O75473 907 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 CXCL10P02778 98 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 FAM86B2P0C5J1 330 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 ARP10275 920 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 FOSBP53539 338 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 ADAM17P78536 824 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 SETQ01105 290 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-215ENST00000555616 GPNMBQ14956 572 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 UTP14CQ5TAP6 766 aaKnown RBP10.92□□□□□ -0.66
ACTN1-215ENST00000555616 DEFB128Q7Z7B8 93 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 FBXO18Q8NFZ0 1043 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 LMBR1Q8WVP7 490 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 SEPT1Q8WYJ6 367 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 SDF4Q9BRK5 362 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 PBX4Q9BYU1 374 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 BRMS1Q9HCU9 246 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms